RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 TELO2Q9Y4R8 837 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 MRVI1Q9Y6F6 885 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 MICAL3Q7RTP6 2002 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 FAM237AA0A1B0GTK4 181 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 VPS37CA5D8V6 355 aaPredicted RBP8.27□□□□□ -1.09
TRIO-213ENST00000509354 KIF28PB7ZC32 967 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 MEIS2O14770 477 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 CPLX1O14810 134 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 TLR3O15455 904 aaKnown RBP8.27□□□□□ -1.09
TRIO-213ENST00000509354 DTNBO60941 627 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 PPFIA3O75145 1194 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 EIF3JO75822 258 aaKnown RBP8.27□□□□□ -1.09
TRIO-213ENST00000509354 CABYRO75952 493 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 GGPS1O95749 300 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 S1PR4O95977 384 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 TIMP1P01033 207 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 CYP2C9P11712 490 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 UBA1P22314 1058 aaKnown RBP8.27□□□□□ -1.09
TRIO-213ENST00000509354 CTHP32929 405 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 SP2Q02086 613 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 LRIT3Q3SXY7 679 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 KRT40Q6A162 431 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 VSIG10LQ86VR7 867 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 FAM160A2Q8N612 972 aaPredicted RBP8.27□□□□□ -1.09
TRIO-213ENST00000509354 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 C8orf76Q96K31 380 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 LZTS2Q9BRK4 669 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 ALG1Q9BT22 464 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 NOC4LQ9BVI4 516 aaKnown RBP8.27□□□□□ -1.09
TRIO-213ENST00000509354 WNT8AQ9H1J5 351 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 PRDM9Q9NQV7 894 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 DDX41Q9UJV9 622 aaKnown RBP8.27□□□□□ -1.09
TRIO-213ENST00000509354 EVPLQ92817 2033 aa8.27□□□□□ -1.09
TRIO-213ENST00000509354 H3BQV1 296 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 STXBP3O00186 592 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 ADAMTS3O15072 1205 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 GADD45BO75293 160 aaPredicted RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 YEATS4O95619 227 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 MMP1P03956 469 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 ACRP10323 421 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 CSF2RAP15509 400 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 CCL23P55773 120 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 SSRP1Q08945 709 aaKnown RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 TRAF1Q13077 416 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 HSDL1Q3SXM5 330 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 FAM109BQ6ICB4 259 aaPredicted RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 MFSD5Q6N075 450 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 RBM43Q6ZSC3 357 aaKnown RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 C16orf59Q7L2K0 433 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 FERMT3Q86UX7 667 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 DHX37Q8IY37 1157 aaKnown RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 KAT2BQ92831 832 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 CUL5Q93034 780 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 PHKBQ93100 1093 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 SCLYQ96I15 445 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 PGBD1Q96JS3 809 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 RNPC3Q96LT9 517 aaKnown RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 INPP4AQ96PE3 977 aaPredicted RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.26□□□□□ -1.093e-6■■■□□ 15.3
TRIO-213ENST00000509354 PHF20Q9BVI0 1012 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 FOXP1Q9H334 677 aaPredicted RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 HIPK3Q9H422 1215 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 SH3GLB2Q9NR46 395 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 MAP3K20Q9NYL2 800 aaKnown RBP8.26□□□□□ -1.09
TRIO-213ENST00000509354 TMEM63CQ9P1W3 806 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 CFAP45Q9UL16 551 aa8.26□□□□□ -1.09
TRIO-213ENST00000509354 COL4A4P53420 1690 aaPredicted RBP8.25□□□□□ -1.09
TRIO-213ENST00000509354 A0A1W2PQ27 194 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 A0A1W2PQ64 194 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 A0A1W2PQD8 194 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 M0R2N6 131 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 PIK3CDO00329 1044 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 ZBTB24O43167 697 aaPredicted RBP8.25□□□□□ -1.09
TRIO-213ENST00000509354 NAPAP54920 295 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 SP4Q02446 784 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 PFKFB3Q16875 520 aaPredicted RBP8.25□□□□□ -1.09
TRIO-213ENST00000509354 BRDTQ58F21 947 aaPredicted RBP8.25□□□□□ -1.09
TRIO-213ENST00000509354 TMEM240Q5SV17 173 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 CELF3Q5SZQ8 465 aaKnown RBP8.25□□□□□ -1.09
TRIO-213ENST00000509354 GDF6Q6KF10 455 aaPredicted RBP8.25□□□□□ -1.09
TRIO-213ENST00000509354 FAM173BQ6P4H8 233 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 TRIM50Q86XT4 487 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 TRIM22Q8IYM9 498 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 SAMD3Q8N6K7 520 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 DAGLBQ8NCG7 672 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 LINC00301Q8NCQ3 95 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 PPTC7Q8NI37 304 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
TRIO-213ENST00000509354 VWCEQ96DN2 955 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 FAM161BQ96MY7 647 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 SPATA33Q96N06 139 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 ZNF396Q96N95 335 aaPredicted RBP8.25□□□□□ -1.09
TRIO-213ENST00000509354 AIFM3Q96NN9 605 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 CTAGE1Q96RT6 745 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 USP28Q96RU2 1077 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 PSTPIP2Q9H939 334 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 TMEM260Q9NX78 707 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 PLA2G2EQ9NZK7 142 aa8.25□□□□□ -1.09
TRIO-213ENST00000509354 V9GY48 417 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms