RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 GAS7O60861 476 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 MAFO75444 373 aaPredicted RBP4.15□□□□□ -1.75
GYPB-207ENST00000506679 KRT37O76014 449 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 EYA4O95677 639 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 CYP17A1P05093 508 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 PTGS1P23219 599 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 LSSP48449 732 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 PHC1P78364 1004 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 TMEM132BQ14DG7 1078 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 STILQ15468 1287 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 GPR158Q5T848 1215 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 TCERG1LQ5VWI1 586 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 ESRP1Q6NXG1 681 aaKnown RBP4.15□□□□□ -1.75
GYPB-207ENST00000506679 LCNL1Q6ZST4 164 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 STRA8Q7Z7C7 330 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 LEO1Q8WVC0 666 aaPredicted RBP4.15□□□□□ -1.75
GYPB-207ENST00000506679 ZSWIM3Q96MP5 696 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 GBP4Q96PP9 640 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 ELF4Q99607 663 aaPredicted RBP4.15□□□□□ -1.75
GYPB-207ENST00000506679 AMNQ9BXJ7 453 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 PCIF1Q9H4Z3 704 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 ZMAT4Q9H898 229 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 SPC25Q9HBM1 224 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 INCENPQ9NQS7 918 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 ZFP69BQ9UJL9 534 aa4.15□□□□□ -1.75
GYPB-207ENST00000506679 DNAJC6O75061 913 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 CYP7B1O75881 506 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 KLHL18O94889 574 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 FKBP9O95302 570 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 KNG1P01042 644 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 SLC9A1P19634 815 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 PTX3P26022 381 aaPredicted RBP4.14□□□□□ -1.75
GYPB-207ENST00000506679 SCNN1BP51168 640 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 MLLT6P55198 1093 aaPredicted RBP4.14□□□□□ -1.75
GYPB-207ENST00000506679 SMAD3P84022 425 aaKnown RBP4.14□□□□□ -1.75
GYPB-207ENST00000506679 EPHA7Q15375 998 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 ZNF174Q15697 407 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 SMAD2Q15796 467 aaKnown RBP4.14□□□□□ -1.75
GYPB-207ENST00000506679 FKBP9P1Q75LS8 142 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 DDX46Q7L014 1031 aaKnown RBP4.14□□□□□ -1.75
GYPB-207ENST00000506679 SIAH1Q8IUQ4 282 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 ADGRG2Q8IZP9 1017 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 FAM177A1Q8N128 213 aaPredicted RBP4.14□□□□□ -1.75
GYPB-207ENST00000506679 CARFQ8N187 725 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 UBR7Q8N806 425 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 FOXB1Q99853 325 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 FAM126AQ9BYI3 521 aaPredicted RBP4.14□□□□□ -1.75
GYPB-207ENST00000506679 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.14□□□□□ -1.75
GYPB-207ENST00000506679 EMC7Q9NPA0 242 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 SPTLC3Q9NUV7 552 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 IFT57Q9NWB7 429 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 THG1LQ9NWX6 298 aaKnown RBP4.14□□□□□ -1.75
GYPB-207ENST00000506679 GALNT8Q9NY28 637 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 NTMQ9P121 344 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 ARHGAP20Q9P2F6 1191 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 ARHGAP28Q9P2N2 729 aa4.14□□□□□ -1.75
GYPB-207ENST00000506679 A0A1B0GTL3 188 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 NEMP1O14524 444 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 ZEB2O60315 1214 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 TRIM13O60858 407 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 PRLP01236 227 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 SARSP49591 514 aaKnown RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 KPNA1P52294 538 aaPredicted RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 SLURP1P55000 103 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 IL13RA1P78552 427 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 OCRLQ01968 901 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 ALDH6A1Q02252 535 aaKnown RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 LRRC32Q14392 662 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 FAM26FQ5R3K3 315 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 RNF187Q5TA31 235 aaPredicted RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 KANK2Q63ZY3 851 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 TTLL7Q6ZT98 887 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 FILIP1Q7Z7B0 1213 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 ZNF761Q86XN6 746 aaPredicted RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 STPG3Q8N7X2 389 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 ZSCAN18Q8TBC5 510 aaPredicted RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 ADAMTS17Q8TE56 1095 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 SCYL1Q96KG9 808 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 YTHDC1Q96MU7 727 aaKnown RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 BTBD2Q9BX70 525 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 IFT22Q9H7X7 185 aa4.13□□□□□ -1.75
GYPB-207ENST00000506679 LUC7LQ9NQ29 371 aaKnown RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 APOBEC2Q9Y235 224 aaKnown RBP4.13□□□□□ -1.75
GYPB-207ENST00000506679 PRAMEF22A3QJZ6 481 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 C9orf118A6NHY6 69 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 BRINP1O60477 761 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 ZSCAN22P10073 491 aaPredicted RBP4.12□□□□□ -1.75
GYPB-207ENST00000506679 IL13P35225 146 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 ECE1P42892 770 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 ID4P47928 161 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 IL2P60568 153 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 STRN3Q13033 797 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 SART3Q15020 963 aaKnown RBP4.12□□□□□ -1.75
GYPB-207ENST00000506679 TERF2Q15554 542 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 VMACQ2NL98 169 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 PHF19Q5T6S3 580 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 PRAMEF18Q5VWM3 479 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 LRSAM1Q6UWE0 723 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 CXXC5Q7LFL8 322 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms