RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 POLR3DP05423 398 aaPredicted RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 GHRP10912 638 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 CEACAM1P13688 526 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 CASTP20810 708 aaKnown RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 CD72P21854 359 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 RFX1P22670 979 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 HOXC13P31276 330 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 MAGEA9P43362 315 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 RPS9P46781 194 aaKnown RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 CDK8P49336 464 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 PDE4BQ07343 736 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 SCAPQ12770 1279 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 HTR4Q13639 388 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 BAATQ14032 418 aaPredicted RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 SIM2Q14190 667 aaPredicted RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 PTPN14Q15678 1187 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 LY6KQ17RY6 165 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 LETM2Q2VYF4 491 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 TKFCQ3LXA3 575 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 TCEAL6Q6IPX3 200 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 TMC5Q6UXY8 1006 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 SLC30A10Q6XR72 485 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 NPAS4Q8IUM7 802 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 BBXQ8WY36 941 aaPredicted RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 TCEAL3Q969E4 200 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 EMID1Q96A84 441 aaPredicted RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 CCDC17Q96LX7 622 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 GPR20Q99678 358 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 C16orf70Q9BSU1 422 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 SMOC1Q9H4F8 434 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 AGO3Q9H9G7 860 aaKnown RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 NGRNQ9NPE2 291 aaKnown RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 DCP1AQ9NPI6 582 aaPredicted RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 TMEM260Q9NX78 707 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 SWAP70Q9UH65 585 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 RAB23Q9ULC3 237 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 SRPK3Q9UPE1 567 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 GON4LQ3T8J9 2241 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 USP9YO00507 2555 aaPredicted RBP4.04□□□□□ -1.76
TCOF1-208ENST00000506063 POLQO75417 2590 aa4.04□□□□□ -1.76
TCOF1-208ENST00000506063 LRRK2Q5S007 2527 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 BSNQ9UPA5 3926 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 NRCAMQ92823 1304 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 FANCIQ9NVI1 1328 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 TNRC6BQ9UPQ9 1833 aaKnown RBP4.03□□□□□ -1.76
TCOF1-208ENST00000506063 CYP2D7A0A087X1C5 515 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 IGKV6D-41A0A0C4DH26 115 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 MAP3K13O43283 966 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 PAPLNO95428 1278 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ALAS1P13196 640 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 CSRP1P21291 193 aaKnown RBP4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ZAP70P43403 619 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 RAP1GAPP47736 663 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 SNAP25P60880 206 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 GPC5P78333 572 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 SNW1Q13573 536 aaKnown RBP4.03□□□□□ -1.76
TCOF1-208ENST00000506063 GAS6Q14393 721 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 UBXN2BQ14CS0 331 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 MLF2Q15773 248 aaPredicted RBP4.03□□□□□ -1.76
TCOF1-208ENST00000506063 DGKDQ16760 1214 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 FBXO47Q5MNV8 452 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 NSMFQ6X4W1 530 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 LRRC55Q6ZSA7 311 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 C16orf86Q6ZW13 317 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.03□□□□□ -1.76
TCOF1-208ENST00000506063 RPAP2Q8IXW5 612 aaPredicted RBP4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ST13P5Q8NFI4 369 aaPredicted RBP4.03□□□□□ -1.76
TCOF1-208ENST00000506063 SDR42E1Q8WUS8 393 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 CLEC4DQ8WXI8 215 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ATP6V0A1Q93050 837 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 NXPE3Q969Y0 559 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 KATNAL1Q9BW62 490 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ARRDC1-AS1Q9H2J1 176 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 CHRDQ9H2X0 955 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 RNPEPQ9H4A4 650 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ENTPD7Q9NQZ7 604 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 DZANK1Q9NVP4 752 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 MCM9Q9NXL9 1143 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 NYAP2Q9P242 653 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 FEM1BQ9UK73 627 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 RAXQ9Y2V3 346 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 SUPT16HQ9Y5B9 1047 aaKnown RBP4.03□□□□□ -1.76
TCOF1-208ENST00000506063 PCDHB12Q9Y5F1 795 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ICE1Q9Y2F5 2266 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 KNTC1P50748 2209 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 ADAMTS9Q9P2N4 1935 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 BOD1L1Q8NFC6 3051 aa4.03□□□□□ -1.76
TCOF1-208ENST00000506063 EVPLQ92817 2033 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 THADAQ6YHU6 1953 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 SPTBN1Q01082 2364 aaKnown RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 MYH6P13533 1939 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 C4orf47A7E2U8 309 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 CHURC1-FNTBB4DL54 471 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 K7ESF4 209 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 RAD21O60216 631 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 MAFO75444 373 aaPredicted RBP4.02□□□□□ -1.77
TCOF1-208ENST00000506063 EPN2O95208 641 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 GH1P01241 217 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 UQCRFS1P1P0C7P4 283 aa4.02□□□□□ -1.77
TCOF1-208ENST00000506063 SMIM10L2AP0DMW4 78 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms