RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 FNDC1Q4ZHG4 1894 aaPredicted RBP25.27■■□□□ 1.64
SUDS3P1-201ENST00000505831 H3BNC9 293 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 LINC00271P0C7V0 271 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 ZNF76P36508 570 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 IER5Q5VY09 327 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 RTN4RL1Q86UN2 441 aaPredicted RBP25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 PLA2G4DQ86XP0 818 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 TMEM192Q8IY95 271 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 CRIPAKQ8N1N5 446 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 TRAPPC12Q8WVT3 735 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 IL17RAQ96F46 866 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 TRPC6Q9Y210 931 aa25.26■■□□□ 1.63
SUDS3P1-201ENST00000505831 POTEB3A0JP26 581 aa25.25■■□□□ 1.63
SUDS3P1-201ENST00000505831 POTEBQ6S5H4 581 aa25.25■■□□□ 1.63
SUDS3P1-201ENST00000505831 MRPL38Q96DV4 380 aaKnown RBP25.25■■□□□ 1.63
SUDS3P1-201ENST00000505831 FAM49AQ9H0Q0 323 aaPredicted RBP25.25■■□□□ 1.63
SUDS3P1-201ENST00000505831 C6orf50Q9HD87 102 aa25.25■■□□□ 1.63
SUDS3P1-201ENST00000505831 KDM3AQ9Y4C1 1321 aa25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 SMIM35A0A1B0GVV1 85 aa25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 EPB41L2O43491 1005 aaKnown RBP25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 REC8O95072 547 aa25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 ATP4AP20648 1035 aa25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 PDIA3P30101 505 aaKnown RBP25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 MTHFD1LQ6UB35 978 aa25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 NME8Q8N427 588 aa25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 CCDC12Q8WUD4 166 aaPredicted RBP25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 PHKBQ93100 1093 aa25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 ZNF689Q96CS4 500 aaPredicted RBP25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 RNF26Q9BY78 433 aaPredicted RBP25.24■■□□□ 1.63
SUDS3P1-201ENST00000505831 IGSF9BQ9UPX0 1349 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 IPO5O00410 1097 aaKnown RBP25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 EDIL3O43854 480 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 HBP1O60381 514 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 IFNAR1P17181 557 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 PSMA5P28066 241 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 GNA11P29992 359 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 CD52P31358 61 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 CIITAP33076 1130 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 GPM6BQ13491 265 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 CCDC60Q8IWA6 550 aaPredicted RBP25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 REXO1Q8N1G1 1221 aaKnown RBP25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 ATP8B4Q8TF62 1192 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 LINC01599Q8WXQ3 324 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 CELF4Q9BZC1 486 aaKnown RBP25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 TRPV2Q9Y5S1 764 aa25.23■■□□□ 1.63
SUDS3P1-201ENST00000505831 C5orf67F2Z3F1 127 aa25.22■■□□□ 1.63
SUDS3P1-201ENST00000505831 DDX39AO00148 427 aaKnown RBP25.22■■□□□ 1.63
SUDS3P1-201ENST00000505831 KLRC1P26715 233 aa25.22■■□□□ 1.63
SUDS3P1-201ENST00000505831 FIBCD1Q8N539 461 aa25.22■■□□□ 1.63
SUDS3P1-201ENST00000505831 CLP1Q92989 425 aaKnown RBP25.22■■□□□ 1.63
SUDS3P1-201ENST00000505831 ZSWIM6Q9HCJ5 1215 aa25.22■■□□□ 1.63
SUDS3P1-201ENST00000505831 TBC1D22BQ9NU19 505 aa25.22■■□□□ 1.63
SUDS3P1-201ENST00000505831 COL1A2P08123 1366 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 ZBTB42B2RXF5 422 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 DGKIO75912 1065 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 TMEM62Q0P6H9 643 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 PTPROQ16827 1216 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 FAM160B1Q5W0V3 765 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 RUFY3Q7L099 469 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 FTHL17Q9BXU8 183 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 UBE2ZQ9H832 354 aaPredicted RBP25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 ZNF302Q9NR11 478 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 PADI3Q9ULW8 664 aa25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 MAFBQ9Y5Q3 323 aaPredicted RBP25.21■■□□□ 1.63
SUDS3P1-201ENST00000505831 RB1P06400 928 aa25.2■■□□□ 1.62
SUDS3P1-201ENST00000505831 TOB2Q14106 344 aaPredicted RBP25.2■■□□□ 1.62
SUDS3P1-201ENST00000505831 ZNF746Q6NUN9 644 aaPredicted RBP25.2■■□□□ 1.62
SUDS3P1-201ENST00000505831 SWSAP1Q6NVH7 229 aa25.2■■□□□ 1.62
SUDS3P1-201ENST00000505831 KIAA0319LQ8IZA0 1049 aa25.2■■□□□ 1.62
SUDS3P1-201ENST00000505831 LENG9Q96B70 501 aa25.2■■□□□ 1.62
SUDS3P1-201ENST00000505831 ZNF577Q9BSK1 485 aa25.2■■□□□ 1.62
SUDS3P1-201ENST00000505831 C5orf42Q9H799 3197 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 PLXNA4Q9HCM2 1894 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 ADGRA3Q8IWK6 1321 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 BACH1O14867 736 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 BMPR1AP36894 532 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 SETQ01105 290 aaPredicted RBP25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 KRT76Q01546 638 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 COL19A1Q14993 1142 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 ZNF484Q5JVG2 852 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 MIS18BP1Q6P0N0 1132 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 FAM43BQ6ZT52 329 aaPredicted RBP25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 RASGRP4Q8TDF6 673 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 UIMC1Q96RL1 719 aa25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 NCOA5Q9HCD5 579 aaKnown RBP25.19■■□□□ 1.62
SUDS3P1-201ENST00000505831 M0QZ92 97 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 PPFIA3O75145 1194 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 CCT2P78371 535 aaKnown RBP25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 AKAP17AQ02040 695 aaKnown RBP25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 LEXMQ3ZCV2 418 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 PDXDC2PQ6P474 469 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 BANK1Q8NDB2 785 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 BICD2Q8TD16 824 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 SLC26A6Q9BXS9 759 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 TMX1Q9H3N1 280 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 CDHR5Q9HBB8 845 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 SH3GLB2Q9NR46 395 aa25.18■■□□□ 1.62
SUDS3P1-201ENST00000505831 PRR16Q569H4 304 aa25.17■■□□□ 1.62
SUDS3P1-201ENST00000505831 SMAP1Q8IYB5 467 aaPredicted RBP25.17■■□□□ 1.62
SUDS3P1-201ENST00000505831 CCDC148Q8NFR7 591 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms