RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 RANBP17Q9H2T7 1088 aaKnown RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 EPB41L4AQ9HCS5 686 aaPredicted RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 MAP4K5Q9Y4K4 846 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 ANKRD11Q6UB99 2663 aaPredicted RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 CNOT1A5YKK6 2376 aaKnown RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 ZFYVE26Q68DK2 2539 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 CACNA1IQ9P0X4 2223 aa8.27□□□□□ -1.08
VCAN-206ENST00000505615 LOXHD1Q8IVV2 1947 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 PTPDC1A2A3K4 754 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 UPP2O95045 317 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 CSPG5O95196 566 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 F2P00734 622 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 BMP2P12643 396 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 DNAJB1P25685 340 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 SLC1A4P43007 532 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 PDE4BQ07343 736 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 PDE4DQ08499 809 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 IKQ13123 557 aaPredicted RBP8.27□□□□□ -1.09
VCAN-206ENST00000505615 SERINC5Q86VE9 423 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 EFHBQ8N7U6 833 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 NEDD1Q8NHV4 660 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 STRBPQ96SI9 672 aaKnown RBP8.27□□□□□ -1.09
VCAN-206ENST00000505615 ALG1Q9BT22 464 aa8.27□□□□□ -1.09
VCAN-206ENST00000505615 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
VCAN-206ENST00000505615 ISY1Q9ULR0 285 aaKnown RBP8.27□□□□□ -1.09
VCAN-206ENST00000505615 BARX2Q9UMQ3 279 aaPredicted RBP8.27□□□□□ -1.09
VCAN-206ENST00000505615 DOCK5Q9H7D0 1870 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 MINDY4BA8MYZ0 360 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 RSPH10B2B2RC85 870 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 GH1P01241 217 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 RSPH10BP0C881 870 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 ZNF286BP0CG31 522 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 HOXD8P13378 290 aaPredicted RBP8.26□□□□□ -1.09
VCAN-206ENST00000505615 ATF7P17544 494 aaPredicted RBP8.26□□□□□ -1.09
VCAN-206ENST00000505615 CASTP20810 708 aaKnown RBP8.26□□□□□ -1.09
VCAN-206ENST00000505615 CALML3P27482 149 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 RPS6P62753 249 aaKnown RBP8.26□□□□□ -1.09
VCAN-206ENST00000505615 LY6KQ17RY6 165 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 KIAA0753Q2KHM9 967 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 RCSD1Q6JBY9 416 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 CEP85Q6P2H3 762 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 GIMAP6Q6P9H5 292 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 DGLUCYQ7Z3D6 616 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 ERC1Q8IUD2 1116 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 FIBCD1Q8N539 461 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 C7orf31Q8N865 590 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 DNERQ8NFT8 737 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 RHPN1Q8TCX5 695 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 IL17RAQ96F46 866 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 RPGRIP1Q96KN7 1286 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 ADGRA3Q8IWK6 1321 aa8.26□□□□□ -1.09
VCAN-206ENST00000505615 IPO8O15397 1037 aaKnown RBP8.25□□□□□ -1.09
VCAN-206ENST00000505615 FSHRP23945 695 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 HOXC8P31273 242 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 THPOP40225 353 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 DGKDQ16760 1214 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 MCTP2Q6DN12 878 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 BTNL9Q6UXG8 535 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 RNF207Q6ZRF8 634 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 ZNF444Q8N0Y2 327 aaPredicted RBP8.25□□□□□ -1.09
VCAN-206ENST00000505615 VN1R2Q8NFZ6 395 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 SEPT8Q92599 483 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 ZNF689Q96CS4 500 aaPredicted RBP8.25□□□□□ -1.09
VCAN-206ENST00000505615 HAUS7Q99871 368 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 KATNAL1Q9BW62 490 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.25□□□□□ -1.09
VCAN-206ENST00000505615 BOLA2Q9H3K6 86 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 PLAGL2Q9UPG8 496 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 RWDD3Q9Y3V2 267 aa8.25□□□□□ -1.09
VCAN-206ENST00000505615 FNDC1Q4ZHG4 1894 aaPredicted RBP8.24□□□□□ -1.09
VCAN-206ENST00000505615 ANP32CO43423 234 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 ITGB1P05556 798 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 ARP10275 920 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 ATP5JP18859 108 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 SLC16A2P36021 539 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 NRIP1P48552 1158 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 RBM10P98175 930 aaKnown RBP8.24□□□□□ -1.09
VCAN-206ENST00000505615 AGERQ15109 404 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 CHST3Q7LGC8 479 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 KCTD17Q8N5Z5 321 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 GPR161Q8N6U8 529 aaKnown RBP8.24□□□□□ -1.09
VCAN-206ENST00000505615 SPPL3Q8TCT6 385 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 PLVAPQ9BX97 442 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 PCDHGC5Q9Y5F6 944 aa8.24□□□□□ -1.09
VCAN-206ENST00000505615 BRD1O95696 1058 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 CTSHP09668 335 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 TSPY3P0CV98 308 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 TSPY8P0CW00 308 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 NOVP48745 357 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 TFAP4Q01664 338 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 SYDE2Q5VT97 1194 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 CLASRPQ8N2M8 674 aaKnown RBP8.23□□□□□ -1.09
VCAN-206ENST00000505615 KREMEN2Q8NCW0 462 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 PPTC7Q8NI37 304 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 ATP8B4Q8TF62 1192 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 FRAT1Q92837 279 aaPredicted RBP8.23□□□□□ -1.09
VCAN-206ENST00000505615 P2RX5Q93086 422 aa8.23□□□□□ -1.09
VCAN-206ENST00000505615 PPP2R3CQ969Q6 453 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms