RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CCDC148Q8NFR7 591 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 ZNF274Q96GC6 653 aaPredicted RBP13.59□□□□□ -0.23
MED28-203ENST00000503945 PCYT2Q99447 389 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 IFIH1Q9BYX4 1025 aaKnown RBP13.59□□□□□ -0.23
MED28-203ENST00000503945 TM6SF1Q9BZW5 370 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 SH3GLB2Q9NR46 395 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 DOCK5Q9H7D0 1870 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 M0QZ92 97 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 DDX39AO00148 427 aaKnown RBP13.58□□□□□ -0.24
MED28-203ENST00000503945 PPFIA3O75145 1194 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 USP11P51784 963 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 NLRP5P59047 1200 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 ITGB3BPQ13352 177 aaPredicted RBP13.58□□□□□ -0.24
MED28-203ENST00000503945 MKRN4PQ13434 485 aaPredicted RBP13.58□□□□□ -0.24
MED28-203ENST00000503945 PLCB4Q15147 1175 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 TMEM31Q5JXX7 168 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 SWSAP1Q6NVH7 229 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 MIS18BP1Q6P0N0 1132 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 CPLX2Q6PUV4 134 aaKnown RBP13.58□□□□□ -0.24
MED28-203ENST00000503945 RUFY4Q6ZNE9 571 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.58□□□□□ -0.24
MED28-203ENST00000503945 C17orf80Q9BSJ5 609 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 ZNF577Q9BSK1 485 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 OSBPL7Q9BZF2 842 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 UBE2ZQ9H832 354 aaPredicted RBP13.58□□□□□ -0.24
MED28-203ENST00000503945 NCOA5Q9HCD5 579 aaKnown RBP13.58□□□□□ -0.24
MED28-203ENST00000503945 C11orf16Q9NQ32 467 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 PDRG1Q9NUG6 133 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 PCDHA2Q9Y5H9 948 aa13.58□□□□□ -0.24
MED28-203ENST00000503945 KAT6AQ92794 2004 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 FAM86C2PA6NEL3 165 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 PI4K2BG5E9Z4 385 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 ENPP3O14638 875 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 DHX15O43143 795 aaKnown RBP13.57□□□□□ -0.24
MED28-203ENST00000503945 HBP1O60381 514 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 GPR37L1O60883 481 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 HTRA4P83105 476 aaPredicted RBP13.57□□□□□ -0.24
MED28-203ENST00000503945 TOB2Q14106 344 aaPredicted RBP13.57□□□□□ -0.24
MED28-203ENST00000503945 ABHD15Q6UXT9 468 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 CRYGNQ8WXF5 182 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 FAM49AQ9H0Q0 323 aaPredicted RBP13.57□□□□□ -0.24
MED28-203ENST00000503945 ZNF302Q9NR11 478 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
MED28-203ENST00000503945 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 IGKV6D-21A0A0A0MT36 114 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.56□□□□□ -0.24
MED28-203ENST00000503945 CCNE2O96020 404 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 GHRP10912 638 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 KLRC1P26715 233 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 CIITAP33076 1130 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 MRPS6P82932 125 aaKnown RBP13.56□□□□□ -0.24
MED28-203ENST00000503945 SETQ01105 290 aaPredicted RBP13.56□□□□□ -0.24
MED28-203ENST00000503945 LEXMQ3ZCV2 418 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 PRR16Q569H4 304 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 MTHFD1LQ6UB35 978 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 CKAP2LQ8IYA6 745 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 FBXO22Q8NEZ5 403 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 IL17RAQ96F46 866 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 UIMC1Q96RL1 719 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 LARP6Q9BRS8 491 aaKnown RBP13.56□□□□□ -0.24
MED28-203ENST00000503945 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 VPS54Q9P1Q0 977 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 ARIH1Q9Y4X5 557 aaPredicted RBP13.56□□□□□ -0.24
MED28-203ENST00000503945 SAMM50Q9Y512 469 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 PCDHA10Q9Y5I2 948 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 CDY2AQ9Y6F7 541 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 SQORQ9Y6N5 450 aa13.56□□□□□ -0.24
MED28-203ENST00000503945 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 MYO7AQ13402 2215 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 SMIM35A0A1B0GVV1 85 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 EIF5BO60841 1220 aaKnown RBP13.55□□□□□ -0.24
MED28-203ENST00000503945 DEXIO95424 95 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 PSAPP07602 524 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 KCNA5P22460 613 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
MED28-203ENST00000503945 STK3Q13188 491 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 LPIN1Q14693 890 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 ZNF484Q5JVG2 852 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 FBXO47Q5MNV8 452 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 ZNF746Q6NUN9 644 aaPredicted RBP13.55□□□□□ -0.24
MED28-203ENST00000503945 FAM178BQ8IXR5 827 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 SMAP1Q8IYB5 467 aaPredicted RBP13.55□□□□□ -0.24
MED28-203ENST00000503945 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
MED28-203ENST00000503945 ATP8B4Q8TF62 1192 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 SAMD11Q96NU1 681 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 CELF4Q9BZC1 486 aaKnown RBP13.55□□□□□ -0.24
MED28-203ENST00000503945 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
MED28-203ENST00000503945 NID2Q14112 1375 aa13.55□□□□□ -0.24
MED28-203ENST00000503945 ADAMTS3O15072 1205 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 IL9P15248 144 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 KRT76Q01546 638 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 MGAT3Q09327 533 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 TMEM62Q0P6H9 643 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 EPC2Q52LR7 807 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 GALNT17Q6IS24 598 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 FAM43BQ6ZT52 329 aaPredicted RBP13.54□□□□□ -0.24
MED28-203ENST00000503945 TRMT1LQ7Z2T5 733 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms