RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PKD2L1Q9P0L9 805 aa24.76■■□□□ 1.55
PCDH1-204ENST00000503492 PPP1R9AQ9ULJ8 1098 aa24.76■■□□□ 1.55
PCDH1-204ENST00000503492 MYO6Q9UM54 1294 aa24.76■■□□□ 1.55
PCDH1-204ENST00000503492 NMT1P30419 496 aaKnown RBP24.76■■□□□ 1.55
PCDH1-204ENST00000503492 HGSNATQ68CP4 663 aa24.76■■□□□ 1.55
PCDH1-204ENST00000503492 LTBP3Q9NS15 1303 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 FZD9O00144 591 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 ENC1O14682 589 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 AKAP3O75969 853 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 POLR2FP61218 127 aaKnown RBP24.75■■□□□ 1.55
PCDH1-204ENST00000503492 BANK1Q8NDB2 785 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 EHBP1Q8NDI1 1231 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 SYTL5Q8TDW5 730 aaPredicted RBP24.75■■□□□ 1.55
PCDH1-204ENST00000503492 DEF6Q9H4E7 631 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 ARMCX3Q9UH62 379 aaPredicted RBP24.75■■□□□ 1.55
PCDH1-204ENST00000503492 PCDHA13Q9Y5I0 950 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 NR3C1P04150 777 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 KIF5AQ12840 1032 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 WHAMMP3Q1A5X7 153 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 ASTE1Q2TB18 679 aaPredicted RBP24.75■■□□□ 1.55
PCDH1-204ENST00000503492 RPAP3Q9H6T3 665 aaPredicted RBP24.75■■□□□ 1.55
PCDH1-204ENST00000503492 PARVGQ9HBI0 331 aa24.75■■□□□ 1.55
PCDH1-204ENST00000503492 ARGLU1Q9NWB6 273 aaPredicted RBP24.75■■□□□ 1.55
PCDH1-204ENST00000503492 EIF3DO15371 548 aaKnown RBP eCLIP24.74■■□□□ 1.55
PCDH1-204ENST00000503492 DHX15O43143 795 aaKnown RBP24.74■■□□□ 1.55
PCDH1-204ENST00000503492 TGFB1I1O43294 461 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 ATP1A1P05023 1023 aaKnown RBP24.74■■□□□ 1.55
PCDH1-204ENST00000503492 MRPS9P82933 396 aaKnown RBP24.74■■□□□ 1.55
PCDH1-204ENST00000503492 NIPA1Q7RTP0 329 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 TRAPPC11Q7Z392 1133 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 FIZ1Q96SL8 496 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 IFIH1Q9BYX4 1025 aaKnown RBP24.74■■□□□ 1.55
PCDH1-204ENST00000503492 HDAC6Q9UBN7 1215 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 UBIAD1Q9Y5Z9 338 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 ZMYM2Q9UBW7 1377 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 CLIC2O15247 247 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 AKR1B10O60218 316 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 TLR2O60603 784 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 EPS15P42566 896 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 MAPK8IP2Q13387 824 aaPredicted RBP24.74■■□□□ 1.55
PCDH1-204ENST00000503492 TKFCQ3LXA3 575 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 ZC2HC1CQ53FD0 456 aaPredicted RBP24.74■■□□□ 1.55
PCDH1-204ENST00000503492 IKZF4Q9H2S9 585 aa24.74■■□□□ 1.55
PCDH1-204ENST00000503492 CASP4P49662 377 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 ZNF131P52739 623 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 SPP2Q13103 211 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 PCNX4Q63HM2 1172 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 SYN2Q92777 582 aaPredicted RBP24.73■■□□□ 1.55
PCDH1-204ENST00000503492 TAAR1Q96RJ0 339 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 PARD6BQ9BYG5 372 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 TSGA10Q9BZW7 698 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 NUCKS1Q9H1E3 243 aaKnown RBP24.73■■□□□ 1.55
PCDH1-204ENST00000503492 GANQ9H2C0 597 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 MACROD2A1Z1Q3 448 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 SFMBT2Q5VUG0 894 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 MIER3Q7Z3K6 550 aa24.73■■□□□ 1.55
PCDH1-204ENST00000503492 AGO4Q9HCK5 861 aaKnown RBP24.73■■□□□ 1.55
PCDH1-204ENST00000503492 SSU72P8A0A1W2PR75 194 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 RPL13P26373 211 aaKnown RBP24.72■■□□□ 1.55
PCDH1-204ENST00000503492 RPS6P62753 249 aaKnown RBP24.72■■□□□ 1.55
PCDH1-204ENST00000503492 ITGB3BPQ13352 177 aaPredicted RBP24.72■■□□□ 1.55
PCDH1-204ENST00000503492 PAPD7Q5XG87 772 aaKnown RBP24.72■■□□□ 1.55
PCDH1-204ENST00000503492 JADE2Q9NQC1 790 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 FAM53CQ9NYF3 392 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 KCND2Q9NZV8 630 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 DOCK1Q14185 1865 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 AFPP02771 609 aaKnown RBP24.72■■□□□ 1.55
PCDH1-204ENST00000503492 DPY19L2P1Q6NXN4 242 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 NEK9Q8TD19 979 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 SEL1LQ9UBV2 794 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 ODF2LQ9ULJ1 636 aa24.72■■□□□ 1.55
PCDH1-204ENST00000503492 SLC16A3O15427 465 aaKnown RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 USO1O60763 962 aaKnown RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 USP14P54578 494 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 ZNF720Q7Z2F6 126 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 KSR1Q8IVT5 923 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 SECISBP2LQ93073 1101 aaKnown RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 WNK4Q96J92 1243 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 MAP3K20Q9NYL2 800 aaKnown RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 CD2APQ9Y5K6 639 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 ZNF541Q9H0D2 1346 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 ZBED4O75132 1171 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 ZRANB2O95218 330 aaKnown RBP eCLIP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 XRCC5P13010 732 aaKnown RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 EIF2AK2P19525 551 aaKnown RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 GFPT1Q06210 699 aaPredicted RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 TDRD12Q587J7 1177 aaKnown RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 PRAMEF18Q5VWM3 479 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 DCAF15Q66K64 600 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 TMCO3Q6UWJ1 677 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 SCYL3Q8IZE3 742 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 ZKSCAN4Q969J2 545 aaPredicted RBP24.71■■□□□ 1.55
PCDH1-204ENST00000503492 ZNF112Q9UJU3 913 aa24.71■■□□□ 1.55
PCDH1-204ENST00000503492 ARHGEF35A5YM69 484 aa24.7■■□□□ 1.54
PCDH1-204ENST00000503492 SERPING1P05155 500 aa24.7■■□□□ 1.54
PCDH1-204ENST00000503492 EPB41P11171 864 aaKnown RBP24.7■■□□□ 1.54
PCDH1-204ENST00000503492 ACTN1P12814 892 aa24.7■■□□□ 1.54
PCDH1-204ENST00000503492 GUCY2CP25092 1073 aa24.7■■□□□ 1.54
PCDH1-204ENST00000503492 SLC9C1Q4G0N8 1177 aa24.7■■□□□ 1.54
PCDH1-204ENST00000503492 ATG4CQ96DT6 458 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms