RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 ZNF76P36508 570 aa29.48■■■□□ 2.31
CUL4A-211ENST00000498562 TMEM62Q0P6H9 643 aa29.48■■■□□ 2.31
CUL4A-211ENST00000498562 TCEAL5Q5H9L2 206 aa29.48■■■□□ 2.31
CUL4A-211ENST00000498562 JAKMIP3Q5VZ66 844 aa29.48■■■□□ 2.31
CUL4A-211ENST00000498562 KIAA1671Q9BY89 1806 aa29.48■■■□□ 2.31
CUL4A-211ENST00000498562 IGSF9BQ9UPX0 1349 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 IGLV3-22A0A075B6J6 115 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 SMIM35A0A1B0GVV1 85 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 ESYT2A0FGR8 921 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 M0QZ92 97 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 ADAMTS3O15072 1205 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 SLC26A2P50443 739 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 FGD1P98174 961 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 MTHFD1LQ6UB35 978 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 ABHD15Q6UXT9 468 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 Q6ZUG5 572 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 CLP1Q92989 425 aaKnown RBP29.47■■■□□ 2.31
CUL4A-211ENST00000498562 NSUN3Q9H649 340 aaKnown RBP29.47■■■□□ 2.31
CUL4A-211ENST00000498562 EPHX3Q9H6B9 360 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 RWDD3Q9Y3V2 267 aa29.47■■■□□ 2.31
CUL4A-211ENST00000498562 CCDC196A0A1B0GTZ2 297 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 DGKIO75912 1065 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 RB1P06400 928 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 CYP3A4P08684 503 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 BMPR1AP36894 532 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 RTN4RL1Q86UN2 441 aaPredicted RBP29.46■■■□□ 2.31
CUL4A-211ENST00000498562 PLA2G4DQ86XP0 818 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 CCDC60Q8IWA6 550 aaPredicted RBP29.46■■■□□ 2.31
CUL4A-211ENST00000498562 NEK9Q8TD19 979 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 KHSRPQ92945 711 aaKnown RBP eCLIP29.46■■■□□ 2.315e-7■■■■□ 20.3
CUL4A-211ENST00000498562 BRF1Q92994 677 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 JAKMIP1Q96N16 626 aaKnown RBP29.46■■■□□ 2.31
CUL4A-211ENST00000498562 C11orf84Q9BUA3 381 aaPredicted RBP29.46■■■□□ 2.31
CUL4A-211ENST00000498562 FTHL17Q9BXU8 183 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 ZMYND12Q9H0C1 365 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 CD320Q9NPF0 282 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 PADI3Q9ULW8 664 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 SNX14Q9Y5W7 946 aa29.46■■■□□ 2.31
CUL4A-211ENST00000498562 KDM3AQ9Y4C1 1321 aa29.45■■■□□ 2.31
CUL4A-211ENST00000498562 DHX15O43143 795 aaKnown RBP29.45■■■□□ 2.31
CUL4A-211ENST00000498562 IL9P15248 144 aa29.45■■■□□ 2.31
CUL4A-211ENST00000498562 HSPA4P34932 840 aa29.45■■■□□ 2.31
CUL4A-211ENST00000498562 COL19A1Q14993 1142 aa29.45■■■□□ 2.31
CUL4A-211ENST00000498562 PKN1Q16512 942 aa29.45■■■□□ 2.31
CUL4A-211ENST00000498562 CRIPAKQ8N1N5 446 aa29.45■■■□□ 2.31
CUL4A-211ENST00000498562 PABPC5Q96DU9 382 aaKnown RBP29.45■■■□□ 2.31
CUL4A-211ENST00000498562 CELF4Q9BZC1 486 aaKnown RBP29.45■■■□□ 2.31
CUL4A-211ENST00000498562 BTG3Q14201 252 aaPredicted RBP29.44■■■□□ 2.3
CUL4A-211ENST00000498562 FAM160B1Q5W0V3 765 aa29.44■■■□□ 2.3
CUL4A-211ENST00000498562 ATP8B4Q8TF62 1192 aa29.44■■■□□ 2.3
CUL4A-211ENST00000498562 LMAN2LQ9H0V9 348 aa29.44■■■□□ 2.3
CUL4A-211ENST00000498562 BACH1O14867 736 aa29.43■■■□□ 2.3
CUL4A-211ENST00000498562 HBP1O60381 514 aa29.43■■■□□ 2.3
CUL4A-211ENST00000498562 PAK2Q13177 524 aa29.43■■■□□ 2.3
CUL4A-211ENST00000498562 PTCRAQ6ISU1 281 aaPredicted RBP29.43■■■□□ 2.3
CUL4A-211ENST00000498562 BLOC1S2Q6QNY1 142 aa29.43■■■□□ 2.3
CUL4A-211ENST00000498562 FAM178BQ8IXR5 827 aa29.43■■■□□ 2.3
CUL4A-211ENST00000498562 NME8Q8N427 588 aa29.43■■■□□ 2.3
CUL4A-211ENST00000498562 AGXT2Q9BYV1 514 aa29.43■■■□□ 2.3
CUL4A-211ENST00000498562 COL1A2P08123 1366 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 H3BQ06 376 aaPredicted RBP29.42■■■□□ 2.3
CUL4A-211ENST00000498562 IPO5O00410 1097 aaKnown RBP29.42■■■□□ 2.3
CUL4A-211ENST00000498562 GRM6O15303 877 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 KLRC1P26715 233 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 KRT76Q01546 638 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 NPAS4Q8IUM7 802 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 FBXL16Q8N461 479 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 CCDC12Q8WUD4 166 aaPredicted RBP29.42■■■□□ 2.3
CUL4A-211ENST00000498562 C6orf50Q9HD87 102 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 ZNF302Q9NR11 478 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 MYO7AQ13402 2215 aa29.42■■■□□ 2.3
CUL4A-211ENST00000498562 GRXCR2A6NFK2 248 aa29.41■■■□□ 2.3
CUL4A-211ENST00000498562 PRPF3O43395 683 aaKnown RBP29.41■■■□□ 2.3
CUL4A-211ENST00000498562 SETQ01105 290 aaPredicted RBP29.41■■■□□ 2.3
CUL4A-211ENST00000498562 MCTP2Q6DN12 878 aa29.41■■■□□ 2.3
CUL4A-211ENST00000498562 MIS18BP1Q6P0N0 1132 aa29.41■■■□□ 2.3
CUL4A-211ENST00000498562 PDXDC2PQ6P474 469 aa29.41■■■□□ 2.3
CUL4A-211ENST00000498562 REXO1Q8N1G1 1221 aaKnown RBP29.41■■■□□ 2.3
CUL4A-211ENST00000498562 UIMC1Q96RL1 719 aa29.41■■■□□ 2.3
CUL4A-211ENST00000498562 TMX1Q9H3N1 280 aa29.41■■■□□ 2.3
CUL4A-211ENST00000498562 MYH9P35579 1960 aaKnown RBP29.41■■■□□ 2.3
CUL4A-211ENST00000498562 EVPLQ92817 2033 aa29.4■■■□□ 2.3
CUL4A-211ENST00000498562 ZBTB42B2RXF5 422 aa29.4■■■□□ 2.3
CUL4A-211ENST00000498562 ATP4AP20648 1035 aa29.4■■■□□ 2.3
CUL4A-211ENST00000498562 RPS6KB1P23443 525 aa29.4■■■□□ 2.3
CUL4A-211ENST00000498562 PUS10Q3MIT2 529 aaKnown RBP29.4■■■□□ 2.3
CUL4A-211ENST00000498562 CMTR2Q8IYT2 770 aaKnown RBP29.4■■■□□ 2.3
CUL4A-211ENST00000498562 PHKBQ93100 1093 aa29.4■■■□□ 2.3
CUL4A-211ENST00000498562 ZNF577Q9BSK1 485 aa29.4■■■□□ 2.3
CUL4A-211ENST00000498562 PLVAPQ9BX97 442 aa29.4■■■□□ 2.3
CUL4A-211ENST00000498562 MRPL42Q9Y6G3 142 aaKnown RBP29.4■■■□□ 2.3
CUL4A-211ENST00000498562 MMP1P03956 469 aa29.39■■■□□ 2.3
CUL4A-211ENST00000498562 NTRK3Q16288 839 aa29.39■■■□□ 2.3
CUL4A-211ENST00000498562 TMEM266Q2M3C6 531 aa29.39■■■□□ 2.3
CUL4A-211ENST00000498562 SWSAP1Q6NVH7 229 aa29.39■■■□□ 2.3
CUL4A-211ENST00000498562 KIAA0319LQ8IZA0 1049 aa29.39■■■□□ 2.3
CUL4A-211ENST00000498562 TBC1D22BQ9NU19 505 aa29.39■■■□□ 2.3
CUL4A-211ENST00000498562 WDR81Q562E7 1941 aa29.39■■■□□ 2.3
CUL4A-211ENST00000498562 GNA11P29992 359 aa29.38■■■□□ 2.29
CUL4A-211ENST00000498562 ZNF484Q5JVG2 852 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms