RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TBC1D22BQ9NU19 505 aa18.27■□□□□ 0.52
NR1H3-227ENST00000498548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.26■□□□□ 0.51
NR1H3-227ENST00000498548 M0R2N6 131 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 MSH4O15457 936 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 AMHP03971 560 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 USP11P51784 963 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 LPIN1Q14693 890 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 KRT40Q6A162 431 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 MTHFD1LQ6UB35 978 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 RAD9AQ99638 391 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 IFIH1Q9BYX4 1025 aaKnown RBP18.26■□□□□ 0.51
NR1H3-227ENST00000498548 PCDHA2Q9Y5H9 948 aa18.26■□□□□ 0.51
NR1H3-227ENST00000498548 HBP1O60381 514 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 TDP2O95551 362 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 KLRC1P26715 233 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 NEK4P51957 841 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 MRPS6P82932 125 aaKnown RBP18.25■□□□□ 0.51
NR1H3-227ENST00000498548 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 ME3Q16798 604 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 ZNF746Q6NUN9 644 aaPredicted RBP18.25■□□□□ 0.51
NR1H3-227ENST00000498548 CKAP2LQ8IYA6 745 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 ATP8B4Q8TF62 1192 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
NR1H3-227ENST00000498548 GABBR1Q9UBS5 961 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 MTUS1Q9ULD2 1270 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 SAMM50Q9Y512 469 aa18.25■□□□□ 0.51
NR1H3-227ENST00000498548 CHMP2AO43633 222 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 CDKL5O76039 1030 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 PSAPP07602 524 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 SLC26A2P50443 739 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 KRT76Q01546 638 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 INF2Q27J81 1249 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 FBXO47Q5MNV8 452 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 DAGLBQ8NCG7 672 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 PHF20Q9BVI0 1012 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 AGO3Q9H9G7 860 aaKnown RBP18.24■□□□□ 0.51
NR1H3-227ENST00000498548 ORC3Q9UBD5 711 aaPredicted RBP18.24■□□□□ 0.51
NR1H3-227ENST00000498548 TCEAL9Q9UHQ7 104 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 PCDHA10Q9Y5I2 948 aa18.24■□□□□ 0.51
NR1H3-227ENST00000498548 CHD9Q3L8U1 2897 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 LINC01553A4QN01 128 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 CD52P31358 61 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 OXER1Q8TDS5 423 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 APBB2Q92870 758 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 SLC5A5Q92911 643 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 TOP1MTQ969P6 601 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 UNC45AQ9H3U1 944 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 MAFBQ9Y5Q3 323 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-227ENST00000498548 TRPV2Q9Y5S1 764 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 STK36Q9NRP7 1315 aa18.23■□□□□ 0.51
NR1H3-227ENST00000498548 SMIM35A0A1B0GVV1 85 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 ZBTB42B2RXF5 422 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 GAS7O60861 476 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 FDPSP14324 419 aaKnown RBP18.22■□□□□ 0.51
NR1H3-227ENST00000498548 FOSBP53539 338 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 GRB10Q13322 594 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 NONOQ15233 471 aaKnown RBP eCLIP18.22■□□□□ 0.51
NR1H3-227ENST00000498548 Q4G0T1 1027 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 ZNF484Q5JVG2 852 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 LRCH2Q5VUJ6 765 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 IER5Q5VY09 327 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 GALNT17Q6IS24 598 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 SMAP1Q8IYB5 467 aaPredicted RBP18.22■□□□□ 0.51
NR1H3-227ENST00000498548 PPP1R16BQ96T49 567 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 TEKT3Q9BXF9 490 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 C22orf23Q9BZE7 217 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 CDHR5Q9HBB8 845 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 DISC1Q9NRI5 854 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 INSL6Q9Y581 213 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 MTCH2Q9Y6C9 303 aa18.22■□□□□ 0.51
NR1H3-227ENST00000498548 CYP3A7-CYP3A51PA0A087WV96 503 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 WDR64B1ANS9 1081 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 ENPP3O14638 875 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 CYP3A7P24462 503 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 HTRA4P83105 476 aaPredicted RBP18.21■□□□□ 0.51
NR1H3-227ENST00000498548 UGCGQ16739 394 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 LETM2Q2VYF4 491 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 TSHZ1Q6ZSZ6 1077 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 KRT25Q7Z3Z0 450 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 GDPD5Q8WTR4 605 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 C17orf80Q9BSJ5 609 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 COL25A1Q9BXS0 654 aaPredicted RBP18.21■□□□□ 0.51
NR1H3-227ENST00000498548 CELF4Q9BZC1 486 aaKnown RBP18.21■□□□□ 0.51
NR1H3-227ENST00000498548 GINS2Q9Y248 185 aa18.21■□□□□ 0.51
NR1H3-227ENST00000498548 COL4A4P53420 1690 aaPredicted RBP18.21■□□□□ 0.51
NR1H3-227ENST00000498548 COL1A2P08123 1366 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 CHD7Q9P2D1 2997 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 CCDC194A0A1B0GVG4 234 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 M0QZ92 97 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 SLC37A4O43826 429 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 ZNF862O60290 1169 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 JAK2O60674 1132 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 LPXNO60711 386 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 PSMD10O75832 226 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 XBP1P17861 261 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 ERVK-21P61565 698 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
NR1H3-227ENST00000498548 EARS2Q5JPH6 523 aaKnown RBP18.2■□□□□ 0.5
NR1H3-227ENST00000498548 PIK3AP1Q6ZUJ8 805 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms