RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 DEXIO95424 95 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 CCNE2O96020 404 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 RPLP2P05387 115 aaKnown RBP9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 GHRP10912 638 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 CIITAP33076 1130 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 MGAT3Q09327 533 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 PRR16Q569H4 304 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 FAM160B1Q5W0V3 765 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 MIS18BP1Q6P0N0 1132 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 ABHD15Q6UXT9 468 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 CCDC60Q8IWA6 550 aaPredicted RBP9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 MICALL1Q8N3F8 863 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 ZBTB10Q96DT7 871 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 UIMC1Q96RL1 719 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 COL25A1Q9BXS0 654 aaPredicted RBP9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 FAM49AQ9H0Q0 323 aaPredicted RBP9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 ZNF302Q9NR11 478 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 TBC1D22BQ9NU19 505 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 INSL6Q9Y581 213 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 CDY2AQ9Y6F7 541 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
HMGXB4-207ENST00000498212 TTC3P53804 2025 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 CHD7Q9P2D1 2997 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 LINC01553A4QN01 128 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 HBP1O60381 514 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 CDKL5O76039 1030 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 POU3F3P20264 500 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 USP11P51784 963 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 ANAPC15P60006 121 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 MRPS6P82932 125 aaKnown RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 HTRA4P83105 476 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 KRT76Q01546 638 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 SCRN1Q12765 414 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 LPIN1Q14693 890 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 FBXO47Q5MNV8 452 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 IER5Q5VY09 327 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 ZNF746Q6NUN9 644 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 SWSAP1Q6NVH7 229 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 SPRED2Q7Z698 418 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 SMAP1Q8IYB5 467 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 TRAPPC12Q8WVT3 735 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 TOP1MTQ969P6 601 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 TGS1Q96RS0 853 aaKnown RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 C22orf23Q9BZE7 217 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 SLKQ9H2G2 1235 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 PRDM6Q9NQX0 595 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 THEGQ9P2T0 379 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 PCDHA4Q9UN74 947 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 PCDHA2Q9Y5H9 948 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 MTCH2Q9Y6C9 303 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 COL1A2P08123 1366 aa9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 TCF20Q9UGU0 1960 aaKnown RBP9.61□□□□□ -0.87
HMGXB4-207ENST00000498212 PRUNE2Q8WUY3 3088 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 FNDC1Q4ZHG4 1894 aaPredicted RBP9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 SMIM35A0A1B0GVV1 85 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 EIF5BO60841 1220 aaKnown RBP9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 UPP2O95045 317 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 PSAPP07602 524 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 KLRC1P26715 233 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 ERVK-21P61565 698 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 GRB10Q13322 594 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 ANKRD1Q15327 319 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 MTHFD1LQ6UB35 978 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 TSHZ1Q6ZSZ6 1077 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 CKAP2LQ8IYA6 745 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 BLIDQ8IZY5 108 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 DAGLBQ8NCG7 672 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 TBCKQ8TEA7 893 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 ATP8B4Q8TF62 1192 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 GDPD5Q8WTR4 605 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 LENG9Q96B70 501 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 AIFM3Q96NN9 605 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 YME1L1Q96TA2 773 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 TSPYL2Q9H2G4 693 aaPredicted RBP9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 SAMM50Q9Y512 469 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 PCDHA10Q9Y5I2 948 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 MAFBQ9Y5Q3 323 aaPredicted RBP9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 TRPV2Q9Y5S1 764 aa9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 PRRC2BQ5JSZ5 2229 aaKnown RBP9.6□□□□□ -0.87
HMGXB4-207ENST00000498212 STK36Q9NRP7 1315 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 ARID2Q68CP9 1835 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 M0R2N6 131 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 MSH4O15457 936 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 EDIL3O43854 480 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 LPXNO60711 386 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 PFKFB2O60825 505 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 XBP1P17861 261 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 ATP4AP20648 1035 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 AK2P54819 239 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 TMEM62Q0P6H9 643 aa9.59□□□□□ -0.87
HMGXB4-207ENST00000498212 NONOQ15233 471 aaKnown RBP eCLIP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms