RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511		H3BM21	787 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	DHX16	O60231	1041 aa	Known RBP	12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	ZNF286B	P0CG31	522 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	THPO	P40225	353 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	ZNF543	Q08ER8	600 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	GPM6B	Q13491	265 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	TCTN1	Q2MV58	587 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	EPC2	Q52LR7	807 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	ARHGEF16	Q5VV41	709 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	CCDC62	Q6P9F0	684 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	MCF2L2	Q86YR7	1114 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	FBXL18	Q96ME1	805 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	RMDN3	Q96TC7	470 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	UPF3B	Q9BZI7	483 aa	Known RBP	12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	DCTPP1	Q9H773	170 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	CLDND1	Q9NY35	253 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	ANAPC4	Q9UJX5	808 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	TET1	Q8NFU7	2136 aa		12.64	□□□□□ -0.39
SKAP2-209	ENST00000497511	RSPH10B2	B2RC85	870 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	PIK3CD	O00329	1044 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	RSPH10B	P0C881	870 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	GOLGA8H	P0CJ92	632 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	EIF2AK2	P19525	551 aa	Known RBP	12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	NOV	P48745	357 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	ZNF200	P98182	395 aa	Predicted RBP	12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	PTS	Q03393	145 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	LAMC2	Q13753	1193 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	TCEAL5	Q5H9L2	206 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	GPATCH4	Q5T3I0	446 aa	Known RBP	12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	VPS53	Q5VIR6	699 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	RGS22	Q8NE09	1264 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	DBF4B	Q8NFT6	615 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	NEK9	Q8TD19	979 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	IRF7	Q92985	503 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	PABPC5	Q96DU9	382 aa	Known RBP	12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	MFSD14A	Q96MC6	490 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	TAAR1	Q96RJ0	339 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	IWS1	Q96ST2	819 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	ESYT1	Q9BSJ8	1104 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	UBA5	Q9GZZ9	404 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	KCNH6	Q9H252	994 aa		12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	NSUN3	Q9H649	340 aa	Known RBP	12.63	□□□□□ -0.39
SKAP2-209	ENST00000497511	ABCB11	O95342	1321 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	LCT	P09848	1927 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	SORBS3	O60504	671 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	F2	P00734	622 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	CDC37	Q16543	378 aa	Predicted RBP	12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	PPTC7	Q8NI37	304 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	PI4K2B	Q8TCG2	481 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	SEPT8	Q92599	483 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	TCP11L1	Q9NUJ3	509 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	PRKAG3	Q9UGI9	489 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	DDX41	Q9UJV9	622 aa	Known RBP	12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	RCAN3	Q9UKA8	241 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511	GTF3C3	Q9Y5Q9	886 aa		12.62	□□□□□ -0.39
SKAP2-209	ENST00000497511		H3BNC9	293 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	FOXP2	O15409	715 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	EIF3J	O75822	258 aa	Known RBP	12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	MX1	P20591	662 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	HAND2	P61296	217 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	HTRA4	P83105	476 aa	Predicted RBP	12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	ZP2	Q05996	745 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	MBTPS1	Q14703	1052 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	CLUL1	Q15846	466 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	C20orf194	Q5TEA3	1177 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	MFSD6	Q6ZSS7	791 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	FBXO11	Q86XK2	927 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	ADHFE1	Q8IWW8	467 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	TMEM192	Q8IY95	271 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	TBC1D5	Q92609	795 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	GLMN	Q92990	594 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	WNT8B	Q93098	351 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	SPATA33	Q96N06	139 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	TTC14	Q96N46	770 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	POP1	Q99575	1024 aa	Known RBP	12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	IFIH1	Q9BYX4	1025 aa	Known RBP	12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	CPVL	Q9H3G5	476 aa		12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	MRPL11	Q9Y3B7	192 aa	Known RBP	12.61	□□□□□ -0.39
SKAP2-209	ENST00000497511	C17orf102	A2RUQ5	167 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	NCK2	O43639	380 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	PPFIA3	O75145	1194 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	CSPG5	O95196	566 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	CFB	P00751	764 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	FGA	P02671	866 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	CTSH	P09668	335 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	FGR	P09769	529 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	MYCL	P12524	364 aa	Predicted RBP	12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	CTNNB1	P35222	781 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	TRIM71	Q2Q1W2	868 aa	Known RBP	12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	LCE2A	Q5TA79	106 aa	Predicted RBP	12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	HFE2	Q6ZVN8	426 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	RPAIN	Q86UA6	219 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	ATP6V0A1	Q93050	837 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	MAF1	Q9H063	256 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	RNF41	Q9H4P4	317 aa	Predicted RBP	12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	VAT1L	Q9HCJ6	419 aa		12.6	□□□□□ -0.39
SKAP2-209	ENST00000497511	HELLS	Q9NRZ9	838 aa		12.6	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms