RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 DNA2P51530 1060 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 PMS2P54278 862 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 DRG2P55039 364 aaKnown RBP14.12□□□□□ -0.15
VEGFA-215ENST00000497139 ACVR2BQ13705 512 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 CNGA2Q16280 664 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 TMTC3Q6ZXV5 915 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 LRRC57Q8N9N7 239 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 KIFAP3Q92845 792 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 IFT43Q96FT9 208 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 TMEM237Q96Q45 408 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 FAM192AQ9GZU8 254 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 DDX47Q9H0S4 455 aaKnown RBP14.12□□□□□ -0.15
VEGFA-215ENST00000497139 PACSIN2Q9UNF0 486 aaPredicted RBP14.12□□□□□ -0.15
VEGFA-215ENST00000497139 STK38LQ9Y2H1 464 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 DIS3Q9Y2L1 958 aaKnown RBP14.12□□□□□ -0.15
VEGFA-215ENST00000497139 ATP8A1Q9Y2Q0 1164 aa14.12□□□□□ -0.15
VEGFA-215ENST00000497139 A8MUI8 341 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 UNC5CO95185 931 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 MBD4O95243 580 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 PSMC4P43686 418 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 PEX5P50542 639 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 RNASE9P60153 205 aaKnown RBP14.11□□□□□ -0.15
VEGFA-215ENST00000497139 STK4Q13043 487 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 TRIM68Q6AZZ1 485 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 MFSD5Q6N075 450 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 TMC4Q7Z404 712 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 SYCE1Q8N0S2 351 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 EPB41L4BQ9H329 900 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 SEMA6BQ9H3T3 888 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 ARHGEF10LQ9HCE6 1279 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.11□□□□□ -0.152e-31■□□□□ 9.6
VEGFA-215ENST00000497139 SUCLA2Q9P2R7 463 aaPredicted RBP14.11□□□□□ -0.15
VEGFA-215ENST00000497139 PRKAG3Q9UGI9 489 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 ANAPC4Q9UJX5 808 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 ATAD5Q96QE3 1844 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 FAM187AA6NFU0 413 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 SPDYE5A6NIY4 337 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
VEGFA-215ENST00000497139 RBM5P52756 815 aaKnown RBP eCLIP14.11□□□□□ -0.151e-9■□□□□ 9.1
VEGFA-215ENST00000497139 SH3BGRP55822 239 aaPredicted RBP14.11□□□□□ -0.15
VEGFA-215ENST00000497139 NLRP5P59047 1200 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 POU5F1Q01860 360 aaKnown RBP14.11□□□□□ -0.15
VEGFA-215ENST00000497139 GRAMD1AQ96CP6 724 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 LRMDAQ9H2I8 198 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 AIPL1Q9NZN9 384 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 AMACRQ9UHK6 382 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 MROH7Q68CQ1 1323 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 CNTNAP5Q8WYK1 1306 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 CASZ1Q86V15 1759 aa14.11□□□□□ -0.15
VEGFA-215ENST00000497139 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 WASHC2DQ5SRD0 308 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 TMEM154Q6P9G4 183 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 PROM2Q8N271 834 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 GUF1Q8N442 669 aaKnown RBP14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ASAP3Q8TDY4 903 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 PIGOQ8TEQ8 1089 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ATP8B4Q8TF62 1192 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 TBC1D5Q92609 795 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 SYT15Q9BQS2 421 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 LMCD1Q9NZU5 365 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ZBTB12Q9Y330 459 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-215ENST00000497139 TTI1O43156 1089 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 TLR2O60603 784 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 PYGLP06737 847 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 TPBGLP0DKB5 382 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 SCG2P13521 617 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 RAD23BP54727 409 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ASIC1P78348 528 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 FAM83BQ5T0W9 1011 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 SLFN11Q7Z7L1 901 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ARHGAP18Q8N392 663 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 INPP5DQ92835 1189 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 NAP1L3Q99457 506 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ROPN1BQ9BZX4 212 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ROPN1Q9HAT0 212 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-215ENST00000497139 DMAP1Q9NPF5 467 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-215ENST00000497139 SH3GLB2Q9NR46 395 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 ZDHHC18Q9NUE0 388 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 SCOCQ9UIL1 159 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
VEGFA-215ENST00000497139 A0A0A6YYK5 440 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-215ENST00000497139 NPEPPSP55786 919 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 IFIT5Q13325 482 aaKnown RBP14.09□□□□□ -0.15
VEGFA-215ENST00000497139 METTL24Q5JXM2 366 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 DUPD1Q68J44 220 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 KRT28Q7Z3Y7 464 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 KIF2BQ8N4N8 673 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 METTL13Q8N6R0 699 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 DNAJC9Q8WXX5 260 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 CCDC28BQ9BUN5 200 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 AP1M1Q9BXS5 423 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 AZI2Q9H6S1 392 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 BZW2Q9Y6E2 419 aaKnown RBP14.09□□□□□ -0.15
VEGFA-215ENST00000497139 ALS2Q96Q42 1657 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 CREB3O43889 395 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 PEX11AO75192 247 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 PLEKHA8P1O95397 391 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 CSF1RP07333 972 aa14.09□□□□□ -0.15
VEGFA-215ENST00000497139 PCP11498 1178 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms