RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PLPPR4Q7Z2D5 763 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 TRAPPC12Q8WVT3 735 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
CXCL12-208ENST00000496375 BACH2Q9BYV9 841 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 AGO3Q9H9G7 860 aaKnown RBP16.37■□□□□ 0.21
CXCL12-208ENST00000496375 KCNA5P22460 613 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 CD52P31358 61 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 CTNNB1P35222 781 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 TMEM62Q0P6H9 643 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 ANKRD1Q15327 319 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 NTRK3Q16288 839 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 TIGD5Q53EQ6 642 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 IER5Q5VY09 327 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 BANK1Q8NDB2 785 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 RC3H2Q9HBD1 1191 aaKnown RBP16.36■□□□□ 0.21
CXCL12-208ENST00000496375 TRPV2Q9Y5S1 764 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 ADGRA3Q8IWK6 1321 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 TTC3P53804 2025 aa16.36■□□□□ 0.21
CXCL12-208ENST00000496375 LOXHD1Q8IVV2 1947 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 M0QZ92 97 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 DDX39AO00148 427 aaKnown RBP16.35■□□□□ 0.21
CXCL12-208ENST00000496375 ATG7O95352 703 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 PFKFB3Q16875 520 aaPredicted RBP16.35■□□□□ 0.21
CXCL12-208ENST00000496375 LEXMQ3ZCV2 418 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 TCEAL5Q5H9L2 206 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 NIPA1Q7RTP0 329 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 LINC01599Q8WXQ3 324 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 UPF2Q9HAU5 1272 aaKnown RBP16.35■□□□□ 0.21
CXCL12-208ENST00000496375 RAPGEFL1Q9UHV5 662 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 PCDHA2Q9Y5H9 948 aa16.35■□□□□ 0.21
CXCL12-208ENST00000496375 FAM86B1E9PN63 330 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 BACH1O14867 736 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 CCNE2O96020 404 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 FAM86B2P0C5J1 330 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 SCG2P13521 617 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 IFNAR1P17181 557 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 SLC26A2P50443 739 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 AK2P54819 239 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.34■□□□□ 0.21
CXCL12-208ENST00000496375 MYO7AQ13402 2215 aa16.34■□□□□ 0.21
CXCL12-208ENST00000496375 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.21
CXCL12-208ENST00000496375 IGKV6D-21A0A0A0MT36 114 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 SMIM35A0A1B0GVV1 85 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 C5orf67F2Z3F1 127 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 RB1P06400 928 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 LINC00271P0C7V0 271 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 BMPR1AP36894 532 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 NEK4P51957 841 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 BTG3Q14201 252 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-208ENST00000496375 FAM160B1Q5W0V3 765 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 MTHFD1LQ6UB35 978 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 ABHD15Q6UXT9 468 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 CCDC60Q8IWA6 550 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-208ENST00000496375 CLP1Q92989 425 aaKnown RBP16.33■□□□□ 0.2
CXCL12-208ENST00000496375 ZNF689Q96CS4 500 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-208ENST00000496375 UIMC1Q96RL1 719 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 FTHL17Q9BXU8 183 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 CELF4Q9BZC1 486 aaKnown RBP16.33■□□□□ 0.2
CXCL12-208ENST00000496375 NSUN3Q9H649 340 aaKnown RBP16.33■□□□□ 0.2
CXCL12-208ENST00000496375 EPHX3Q9H6B9 360 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 TPCN1Q9ULQ1 816 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 PADI3Q9ULW8 664 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 RWDD3Q9Y3V2 267 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 SQORQ9Y6N5 450 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 IGSF9BQ9UPX0 1349 aa16.33■□□□□ 0.2
CXCL12-208ENST00000496375 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 ESYT2A0FGR8 921 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 H3BQ06 376 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-208ENST00000496375 ADAMTS3O15072 1205 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 GRM6O15303 877 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 HBP1O60381 514 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 PFKFB2O60825 505 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 DGKIO75912 1065 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 CYP3A4P08684 503 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 KLRC1P26715 233 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 PAK2Q13177 524 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 PTCRAQ6ISU1 281 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-208ENST00000496375 EP400NLQ6ZTU2 488 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 RTN4RL1Q86UN2 441 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-208ENST00000496375 NME8Q8N427 588 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 NEK9Q8TD19 979 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 ATP8B4Q8TF62 1192 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 CRYGNQ8WXF5 182 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 KHSRPQ92945 711 aaKnown RBP eCLIP16.32■□□□□ 0.2
CXCL12-208ENST00000496375 C11orf84Q9BUA3 381 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-208ENST00000496375 RNF26Q9BY78 433 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-208ENST00000496375 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 CD320Q9NPF0 282 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 ZNF302Q9NR11 478 aa16.32■□□□□ 0.2
CXCL12-208ENST00000496375 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
CXCL12-208ENST00000496375 IPO5O00410 1097 aaKnown RBP16.31■□□□□ 0.2
CXCL12-208ENST00000496375 DHX15O43143 795 aaKnown RBP16.31■□□□□ 0.2
CXCL12-208ENST00000496375 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms