RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 ANKRD40Q6AI12 368 aa16.33■□□□□ 0.21
MACF1-223ENST00000496360 RRAGAQ7L523 313 aa16.33■□□□□ 0.21
MACF1-223ENST00000496360 CATIPQ7Z7H3 387 aa16.33■□□□□ 0.21
MACF1-223ENST00000496360 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.21
MACF1-223ENST00000496360 RAB17Q9H0T7 212 aa16.33■□□□□ 0.21
MACF1-223ENST00000496360 LAMB2P55268 1798 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 WNT7AO00755 349 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
MACF1-223ENST00000496360 DIAPH2O60879 1101 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 CSF1RP07333 972 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 NUDT17P0C025 328 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 PEX19P40855 299 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 SLC1A4P43007 532 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 AMPD3Q01432 767 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 MAP3K12Q12852 859 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.2
MACF1-223ENST00000496360 RPS6KA1Q15418 735 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 PI16Q6UXB8 463 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 TBC1D1Q86TI0 1168 aaPredicted RBP16.33■□□□□ 0.2
MACF1-223ENST00000496360 PARD3BQ8TEW8 1205 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 C7orf25Q9BPX7 421 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
MACF1-223ENST00000496360 MYH10P35580 1976 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 SNED1Q8TER0 1413 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 GLTPD2A6NH11 291 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 CCDC169A6NNP5 214 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 GSG1L2A8MUP6 293 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 BUB1O43683 1085 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 PPFIA2O75334 1257 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 MMEP08473 750 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 PCP11498 1178 aaKnown RBP16.32■□□□□ 0.2
MACF1-223ENST00000496360 ATP2A2P16615 1042 aaKnown RBP16.32■□□□□ 0.2
MACF1-223ENST00000496360 SKIV2L2P42285 1042 aaKnown RBP16.32■□□□□ 0.2
MACF1-223ENST00000496360 MRPS35P82673 323 aaKnown RBP16.32■□□□□ 0.2
MACF1-223ENST00000496360 ATP11AP98196 1134 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 DTHD1Q6ZMT9 781 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 CFAP61Q8NHU2 1237 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 AK8Q96MA6 479 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 CEP72Q9P209 647 aa16.32■□□□□ 0.2
MACF1-223ENST00000496360 PGRMC1O00264 195 aaKnown RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 O00370 1275 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 RTN3O95197 1032 aaPredicted RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 NPTXRO95502 500 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 UBA7P41226 1012 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 PAPOLAP51003 745 aaKnown RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 PDE6CP51160 858 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 USP11P51784 963 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 GALNTL6Q49A17 601 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 METTL24Q5JXM2 366 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 HGSNATQ68CP4 663 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 CENPPQ6IPU0 288 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 KLHL7Q8IXQ5 586 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 ZBTB38Q8NAP3 1195 aaPredicted RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 MMRN2Q9H8L6 949 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 ZNF277Q9NRM2 450 aaPredicted RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 PANK4Q9NVE7 773 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 V9GY48 417 aaPredicted RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 MBD4O95243 580 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 MCM7P33993 719 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 NCALDP61601 193 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 GFPT1Q06210 699 aaPredicted RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 LBRQ14739 615 aaKnown RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 RRP12Q5JTH9 1297 aaKnown RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 LMNTD2Q8IXW0 634 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 CMTR1Q8N1G2 835 aaKnown RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 DRAXINQ8NBI3 349 aaPredicted RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 ATXN2LQ8WWM7 1075 aaKnown RBP16.31■□□□□ 0.2
MACF1-223ENST00000496360 ZBTB10Q96DT7 871 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 TSC22D3Q99576 134 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 L3MBTL1Q9Y468 752 aa16.31■□□□□ 0.2
MACF1-223ENST00000496360 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
MACF1-223ENST00000496360 IRF6O14896 467 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 AGTP01019 485 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 CNGA1P29973 690 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 PDE4DQ08499 809 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 SLC18A3Q16572 532 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 SGSM1Q2NKQ1 1148 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 ANKRD20A2Q5SQ80 823 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 ANKRD20A1Q5TYW2 823 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 SFMBT2Q5VUG0 894 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 ANKRD20A3Q5VUR7 823 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.3■□□□□ 0.21e-15■□□□□ 9.6
MACF1-223ENST00000496360 RRAGCQ9HB90 399 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 SH3GLB2Q9NR46 395 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 ARHGEF3Q9NR81 526 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 FAM207AQ9NSI2 230 aaPredicted RBP16.3■□□□□ 0.2
MACF1-223ENST00000496360 TNKSO95271 1327 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
MACF1-223ENST00000496360 BBOX1O75936 387 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 KIF4AO95239 1232 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 LINGO3P0C6S8 592 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 CHN1P15882 459 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 NLRP5P59047 1200 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 EHHADHQ08426 723 aa16.3■□□□□ 0.2
MACF1-223ENST00000496360 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms