RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 REXO1L1PQ8IX06 675 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 NEU4Q8WWR8 484 aaPredicted RBP5.48□□□□□ -1.53
CLK1-214ENST00000496205 TMEM260Q9NX78 707 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 A0A1W2PQU0 124 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 RAC3P60763 192 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 FNDC7Q5VTL7 733 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 CD276Q5ZPR3 534 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 MAMDC4Q6UXC1 1216 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 GPATCH3Q96I76 525 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 TACO1Q9BSH4 297 aaKnown RBP5.47□□□□□ -1.53
CLK1-214ENST00000496205 SPATA9Q9BWV2 254 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 ARHGEF4Q9NR80 690 aa5.47□□□□□ -1.53
CLK1-214ENST00000496205 A0A087X1B8 175 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 ANKRD62A6NC57 917 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 H0Y858 1186 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 PPP1R12AO14974 1030 aaPredicted RBP5.46□□□□□ -1.54
CLK1-214ENST00000496205 CDC45O75419 566 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 ENO2P09104 434 aaPredicted RBP5.46□□□□□ -1.54
CLK1-214ENST00000496205 COL6A2P12110 1019 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 DUSP8Q13202 625 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 OTOP3Q7RTS5 596 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 THAP3Q8WTV1 239 aaPredicted RBP5.46□□□□□ -1.54
CLK1-214ENST00000496205 CACTINQ8WUQ7 758 aaKnown RBP5.46□□□□□ -1.54
CLK1-214ENST00000496205 ZNF669Q96BR6 464 aaPredicted RBP5.46□□□□□ -1.54
CLK1-214ENST00000496205 EXOC2Q96KP1 924 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 PLEKHG4BQ96PX9 1271 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 PUS7Q96PZ0 661 aaKnown RBP5.46□□□□□ -1.54
CLK1-214ENST00000496205 DPYSL5Q9BPU6 564 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 CARD11Q9BXL7 1154 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 PDGFDQ9GZP0 370 aaPredicted RBP5.46□□□□□ -1.54
CLK1-214ENST00000496205 OAZ3Q9UMX2 235 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 SLC30A1Q9Y6M5 507 aa5.46□□□□□ -1.54
CLK1-214ENST00000496205 ZNF839A8K0R7 811 aa5.45□□□□□ -1.54
CLK1-214ENST00000496205 MATN2O00339 956 aa5.45□□□□□ -1.54
CLK1-214ENST00000496205 CR2P20023 1033 aa5.45□□□□□ -1.54
CLK1-214ENST00000496205 CANXP27824 592 aaKnown RBP5.45□□□□□ -1.54
CLK1-214ENST00000496205 INHBCP55103 352 aa5.45□□□□□ -1.54
CLK1-214ENST00000496205 KIAA0907Q7Z7F0 614 aaPredicted RBP5.45□□□□□ -1.54
CLK1-214ENST00000496205 LDLRAD3Q86YD5 345 aa5.45□□□□□ -1.54
CLK1-214ENST00000496205 ACOT7O00154 380 aa5.44□□□□□ -1.54
CLK1-214ENST00000496205 NKRFO15226 690 aaKnown RBP eCLIP5.44□□□□□ -1.54
CLK1-214ENST00000496205 PPP2R2AP63151 447 aa5.44□□□□□ -1.54
CLK1-214ENST00000496205 C21orf62-AS1Q17RA5 79 aa5.44□□□□□ -1.54
CLK1-214ENST00000496205 POLNQ7Z5Q5 900 aa5.44□□□□□ -1.54
CLK1-214ENST00000496205 ZNF808Q8N4W9 903 aaPredicted RBP5.44□□□□□ -1.54
CLK1-214ENST00000496205 ZBTB38Q8NAP3 1195 aaPredicted RBP5.44□□□□□ -1.54
CLK1-214ENST00000496205 UHMK1Q8TAS1 419 aaKnown RBP5.44□□□□□ -1.54
CLK1-214ENST00000496205 LARP4BQ92615 738 aaKnown RBP5.44□□□□□ -1.54
CLK1-214ENST00000496205 APPBP2Q92624 585 aa5.44□□□□□ -1.54
CLK1-214ENST00000496205 OR14A2Q96R54 314 aa5.44□□□□□ -1.54
CLK1-214ENST00000496205 EPN3Q9H201 632 aa5.44□□□□□ -1.54
CLK1-214ENST00000496205 GPR27Q9NS67 375 aa5.44□□□□□ -1.54
CLK1-214ENST00000496205 CDC14BO60729 498 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 POLD1P28340 1107 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 TOP3AQ13472 1001 aaPredicted RBP5.43□□□□□ -1.54
CLK1-214ENST00000496205 TBR1Q16650 682 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 FAM209AQ5JX71 171 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 C16orf86Q6ZW13 317 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 HOMER1Q86YM7 354 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 DNAJC10Q8IXB1 793 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 PLA2G12BQ9BX93 195 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 MMRN2Q9H8L6 949 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 CD2APQ9Y5K6 639 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 TNFRSF18Q9Y5U5 241 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 PCSK5Q92824 1860 aa5.43□□□□□ -1.54
CLK1-214ENST00000496205 ASMTLO95671 621 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 ACRV1P26436 265 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 RRADP55042 308 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 HNRNPA0Q13151 305 aaKnown RBP5.42□□□□□ -1.54
CLK1-214ENST00000496205 ZNF568Q3ZCX4 644 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 HABP4Q5JVS0 413 aaKnown RBP5.42□□□□□ -1.54
CLK1-214ENST00000496205 PCSK4Q6UW60 755 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 ZNF627Q7L945 461 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.42□□□□□ -1.54
CLK1-214ENST00000496205 LRRC47Q8N1G4 583 aaKnown RBP5.42□□□□□ -1.54
CLK1-214ENST00000496205 OSBP2Q969R2 916 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 SGSM3Q96HU1 749 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 AGAP2Q99490 1192 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 KCNJ15Q99712 375 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 PHF20Q9BVI0 1012 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 SLC39A2Q9NP94 309 aa5.42□□□□□ -1.54
CLK1-214ENST00000496205 DLX3O60479 287 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 EPHA5P54756 1037 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 GYS2P54840 703 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 MAP4K2Q12851 820 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 FOXL1Q12952 345 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 TUBA3CQ13748 450 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 TUBA3EQ6PEY2 450 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 ZSWIM2Q8NEG5 633 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 FAM89AQ96GI7 184 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 NR2E1Q9Y466 385 aa5.41□□□□□ -1.54
CLK1-214ENST00000496205 DALRD3Q5D0E6 543 aaKnown RBP5.4□□□□□ -1.54
CLK1-214ENST00000496205 KCNT2Q6UVM3 1135 aa5.4□□□□□ -1.54
CLK1-214ENST00000496205 USP53Q70EK8 1073 aa5.4□□□□□ -1.54
CLK1-214ENST00000496205 KCTD13Q8WZ19 329 aa5.4□□□□□ -1.54
CLK1-214ENST00000496205 CFHR4Q92496 578 aa5.4□□□□□ -1.54
CLK1-214ENST00000496205 CLUHP3Q96NS8 147 aa5.4□□□□□ -1.54
CLK1-214ENST00000496205 AARSD1Q9BTE6 412 aaKnown RBP5.4□□□□□ -1.54
CLK1-214ENST00000496205 IER2Q9BTL4 223 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms