RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 LPIN1Q14693 890 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 POTEBQ6S5H4 581 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 BLIDQ8IZY5 108 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 TBCKQ8TEA7 893 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 PPP1R16BQ96T49 567 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 SLKQ9H2G2 1235 aaPredicted RBP12.05□□□□□ -0.48
NELFE-213ENST00000494956 ZNF302Q9NR11 478 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 SH3GLB2Q9NR46 395 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 PCDHA4Q9UN74 947 aa12.05□□□□□ -0.48
NELFE-213ENST00000494956 CHMP2AO43633 222 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 PFKFB2O60825 505 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 FOSBP53539 338 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 ME3Q16798 604 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 PDXDC2PQ6P474 469 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 MTHFD1LQ6UB35 978 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 PLPPR4Q7Z2D5 763 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 BICD2Q8TD16 824 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 OXER1Q8TDS5 423 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 GDPD5Q8WTR4 605 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 SEPT8Q92599 483 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 COL25A1Q9BXS0 654 aaPredicted RBP12.04□□□□□ -0.48
NELFE-213ENST00000494956 IFIH1Q9BYX4 1025 aaKnown RBP12.04□□□□□ -0.48
NELFE-213ENST00000494956 AGO3Q9H9G7 860 aaKnown RBP12.04□□□□□ -0.48
NELFE-213ENST00000494956 CDHR5Q9HBB8 845 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 PRRC2BQ5JSZ5 2229 aaKnown RBP12.04□□□□□ -0.48
NELFE-213ENST00000494956 NLRC5Q86WI3 1866 aa12.04□□□□□ -0.48
NELFE-213ENST00000494956 LINC01553A4QN01 128 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 RRN3P2A6NIE6 340 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 ZBTB42B2RXF5 422 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 LPXNO60711 386 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 CAND2O75155 1236 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 AMHP03971 560 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 KLRC1P26715 233 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 CD52P31358 61 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 MRPS6P82932 125 aaKnown RBP12.03□□□□□ -0.48
NELFE-213ENST00000494956 SETQ01105 290 aaPredicted RBP12.03□□□□□ -0.48
NELFE-213ENST00000494956 ST3GAL1Q11201 340 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 GRB10Q13322 594 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 UGCGQ16739 394 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 INF2Q27J81 1249 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 EARS2Q5JPH6 523 aaKnown RBP12.03□□□□□ -0.48
NELFE-213ENST00000494956 FBXO47Q5MNV8 452 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 FAM160B1Q5W0V3 765 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 MIS18BP1Q6P0N0 1132 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 LINC01599Q8WXQ3 324 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 RAD9AQ99638 391 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 C17orf80Q9BSJ5 609 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 GABBR1Q9UBS5 961 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 SAMM50Q9Y512 469 aa12.03□□□□□ -0.48
NELFE-213ENST00000494956 REV3LO60673 3130 aa12.02□□□□□ -0.48
NELFE-213ENST00000494956 SLC37A4O43826 429 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 FDPSP14324 419 aaKnown RBP12.02□□□□□ -0.49
NELFE-213ENST00000494956 NEK4P51957 841 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 ANAPC15P60006 121 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 TMEM266Q2M3C6 531 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 MCTP2Q6DN12 878 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 ZNF746Q6NUN9 644 aaPredicted RBP12.02□□□□□ -0.49
NELFE-213ENST00000494956 CPLX2Q6PUV4 134 aaKnown RBP12.02□□□□□ -0.49
NELFE-213ENST00000494956 RSPH3Q86UC2 560 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 RTN4RL1Q86UN2 441 aaPredicted RBP12.02□□□□□ -0.49
NELFE-213ENST00000494956 CKAP2LQ8IYA6 745 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 DAGLBQ8NCG7 672 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 ATP8B4Q8TF62 1192 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 TOP1MTQ969P6 601 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 PHF20Q9BVI0 1012 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 UNC45AQ9H3U1 944 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 TBC1D22BQ9NU19 505 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 ORC3Q9UBD5 711 aaPredicted RBP12.02□□□□□ -0.49
NELFE-213ENST00000494956 GINS2Q9Y248 185 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 PCDHA2Q9Y5H9 948 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 MAFBQ9Y5Q3 323 aaPredicted RBP12.02□□□□□ -0.49
NELFE-213ENST00000494956 TRPV2Q9Y5S1 764 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 MTCH2Q9Y6C9 303 aa12.02□□□□□ -0.49
NELFE-213ENST00000494956 UNC80Q8N2C7 3258 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 SMIM35A0A1B0GVV1 85 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 TMEM150BA6NC51 233 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 ZNF862O60290 1169 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 HBP1O60381 514 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 JAK2O60674 1132 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 GAS7O60861 476 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 EFCAB14O75071 495 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 PSAPP07602 524 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 IBSPP21815 317 aaPredicted RBP12.01□□□□□ -0.49
NELFE-213ENST00000494956 USP11P51784 963 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 HTRA4P83105 476 aaPredicted RBP12.01□□□□□ -0.49
NELFE-213ENST00000494956 KRT76Q01546 638 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 LRCH2Q5VUJ6 765 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 TMEM40Q8WWA1 233 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 SLC5A5Q92911 643 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 ZNF668Q96K58 619 aaPredicted RBP12.01□□□□□ -0.49
NELFE-213ENST00000494956 SH2D3AQ9BRG2 576 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 CELF4Q9BZC1 486 aaKnown RBP12.01□□□□□ -0.49
NELFE-213ENST00000494956 SUGCTQ9HAC7 445 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 DISC1Q9NRI5 854 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 PCDHA10Q9Y5I2 948 aa12.01□□□□□ -0.49
NELFE-213ENST00000494956 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms