RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 EFCAB13Q8IY85 973 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 KCTD17Q8N5Z5 321 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 PPM1EQ8WY54 764 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 IFT81Q8WYA0 676 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 ZFP91Q96JP5 570 aaPredicted RBP16.3■□□□□ 0.2
UBXN11-215ENST00000494942 PACSIN1Q9BY11 444 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 TMEM59LQ9UK28 342 aa16.3■□□□□ 0.2
UBXN11-215ENST00000494942 EBAG9O00559 213 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 SLC16A3O15427 465 aaKnown RBP16.29■□□□□ 0.2
UBXN11-215ENST00000494942 ENOX2Q16206 610 aaKnown RBP16.29■□□□□ 0.2
UBXN11-215ENST00000494942 BMT2Q1RMZ1 405 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 PRR16Q569H4 304 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 SLFN13Q68D06 897 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 APOBEC3HQ6NTF7 200 aaKnown RBP16.29■□□□□ 0.2
UBXN11-215ENST00000494942 DPY19L2P1Q6NXN4 242 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
UBXN11-215ENST00000494942 ARL8AQ96BM9 186 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 CCDC43Q96MW1 224 aaKnown RBP16.29■□□□□ 0.2
UBXN11-215ENST00000494942 PLEKHA4Q9H4M7 779 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 FLOT1O75955 427 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 EEF2P13639 858 aaKnown RBP16.29■□□□□ 0.2
UBXN11-215ENST00000494942 PON1P27169 355 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 SCNN1DP51172 638 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 DNA2P51530 1060 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 CASP5P51878 434 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 ZNF571Q7Z3V5 609 aaPredicted RBP16.29■□□□□ 0.2
UBXN11-215ENST00000494942 VPS36Q86VN1 386 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 SFR1Q86XK3 245 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 BCAS4Q8TDM0 211 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 AMNQ9BXJ7 453 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 TYW1Q9NV66 732 aaKnown RBP16.29■□□□□ 0.2
UBXN11-215ENST00000494942 NAGPAQ9UK23 515 aa16.29■□□□□ 0.2
UBXN11-215ENST00000494942 GRIN2DO15399 1336 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 SPATA31C1P0DKV0 1188 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 MYBP10242 640 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 SLC9A1P19634 815 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBXN11-215ENST00000494942 ACTRT1Q8TDG2 376 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 LMBR1Q8WVP7 490 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 CALR3Q96L12 384 aaKnown RBP16.28■□□□□ 0.2
UBXN11-215ENST00000494942 UIMC1Q96RL1 719 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
UBXN11-215ENST00000494942 POLRMTO00411 1230 aaKnown RBP16.28■□□□□ 0.2
UBXN11-215ENST00000494942 KCNK3O14649 394 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 RAD21O60216 631 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 KIF4AO95239 1232 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 FAM153BP0C7A2 387 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 ACTN1P12814 892 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 DDR1Q08345 913 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 FAM153CQ494X1 144 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 EMC10Q5UCC4 262 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 ALKBH5Q6P6C2 394 aaKnown RBP16.28■□□□□ 0.2
UBXN11-215ENST00000494942 CASKIN2Q8WXE0 1202 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 FAM153AQ9UHL3 310 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 INTUQ9ULD6 942 aa16.28■□□□□ 0.2
UBXN11-215ENST00000494942 ESYT3A0FGR9 886 aa16.27■□□□□ 0.2
UBXN11-215ENST00000494942 GTPBP10A4D1E9 387 aaKnown RBP16.27■□□□□ 0.2
UBXN11-215ENST00000494942 SPDYE3A6NKU9 549 aa16.27■□□□□ 0.2
UBXN11-215ENST00000494942 HOXD13P35453 343 aa16.27■□□□□ 0.2
UBXN11-215ENST00000494942 SREBF1P36956 1147 aa16.27■□□□□ 0.2
UBXN11-215ENST00000494942 CCT5P48643 541 aa16.27■□□□□ 0.2
UBXN11-215ENST00000494942 PSMC6P62333 389 aa16.27■□□□□ 0.2
UBXN11-215ENST00000494942 EPHA7Q15375 998 aa16.27■□□□□ 0.2
UBXN11-215ENST00000494942 CERKLQ49MI3 558 aaPredicted RBP16.27■□□□□ 0.2
UBXN11-215ENST00000494942 LRRC57Q8N9N7 239 aa16.27■□□□□ 0.2
UBXN11-215ENST00000494942 TAF1DQ9H5J8 278 aaPredicted RBP16.27■□□□□ 0.2
UBXN11-215ENST00000494942 A0A0A6YYK5 440 aaPredicted RBP16.27■□□□□ 0.19
UBXN11-215ENST00000494942 ZSCAN5CA6NGD5 496 aaPredicted RBP16.27■□□□□ 0.19
UBXN11-215ENST00000494942 RAD51CO43502 376 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 KRT14P02533 472 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 NR3C1P04150 777 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 CIITAP33076 1130 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 NOP2P46087 812 aaKnown RBP16.27■□□□□ 0.19
UBXN11-215ENST00000494942 NFIAQ12857 509 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 CUL1Q13616 776 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 KDM7AQ6ZMT4 941 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 SCFD2Q8WU76 684 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 LENG9Q96B70 501 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 POLR3CQ9BUI4 534 aaPredicted RBP16.27■□□□□ 0.19
UBXN11-215ENST00000494942 ISCUQ9H1K1 167 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 DNAJC18Q9H819 358 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 PI4KBQ9UBF8 816 aa16.27■□□□□ 0.19
UBXN11-215ENST00000494942 A0A087WUV0 522 aaPredicted RBP16.26■□□□□ 0.19
UBXN11-215ENST00000494942 ZNF233A6NK53 670 aa16.26■□□□□ 0.19
UBXN11-215ENST00000494942 MEIS1O00470 390 aa16.26■□□□□ 0.19
UBXN11-215ENST00000494942 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
UBXN11-215ENST00000494942 AKAP3O75969 853 aa16.26■□□□□ 0.19
UBXN11-215ENST00000494942 HSPA9P38646 679 aaKnown RBP16.26■□□□□ 0.19
UBXN11-215ENST00000494942 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
UBXN11-215ENST00000494942 ZDHHC15Q96MV8 337 aa16.26■□□□□ 0.19
UBXN11-215ENST00000494942 G3V3G9 751 aa16.25■□□□□ 0.19
UBXN11-215ENST00000494942 GFPT2O94808 682 aa16.25■□□□□ 0.19
UBXN11-215ENST00000494942 GAP43P17677 238 aa16.25■□□□□ 0.19
UBXN11-215ENST00000494942 CRKP46108 304 aa16.25■□□□□ 0.19
UBXN11-215ENST00000494942 MMP14P50281 582 aa16.25■□□□□ 0.19
UBXN11-215ENST00000494942 GUCY2FP51841 1108 aa16.25■□□□□ 0.19
UBXN11-215ENST00000494942 JAM2P57087 298 aa16.25■□□□□ 0.19
UBXN11-215ENST00000494942 DCAF17Q5H9S7 520 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms