RNA–Protein interactions for RNA: ENST00000493947.5

ZNF655-223, Transcript of zinc finger protein 655, human

TSL 4

Gene ZNF655, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF655-223	ENST00000493947	SDF4	Q9BRK5	362 aa		18.95	■□□□□ 0.62
ZNF655-223	ENST00000493947	C1QTNF1	Q9BXJ1	281 aa		18.95	■□□□□ 0.62
ZNF655-223	ENST00000493947	FAM49A	Q9H0Q0	323 aa	Predicted RBP	18.95	■□□□□ 0.62
ZNF655-223	ENST00000493947	IGSF9B	Q9UPX0	1349 aa		18.95	■□□□□ 0.62
ZNF655-223	ENST00000493947	ADD1	P35611	737 aa	Known RBP	18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	BMPR1A	P36894	532 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	KRT32	Q14532	448 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	PFKFB3	Q16875	520 aa	Predicted RBP	18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	TCEAL5	Q5H9L2	206 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	ABHD15	Q6UXT9	468 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	FAM178B	Q8IXR5	827 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	AZI2	Q9H6S1	392 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	C11orf16	Q9NQ32	467 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	TRPC6	Q9Y210	931 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	TRPV2	Q9Y5S1	764 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	KDM3A	Q9Y4C1	1321 aa		18.94	■□□□□ 0.62
ZNF655-223	ENST00000493947	ZBTB42	B2RXF5	422 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	GRM6	O15303	877 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	RB1	P06400	928 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	IL9	P15248	144 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	CTNNB1	P35222	781 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	TMEM62	Q0P6H9	643 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	PKN1	Q16512	942 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	IER5	Q5VY09	327 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	PABPC5	Q96DU9	382 aa	Known RBP	18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	GLT8D2	Q9H1C3	349 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	NSUN3	Q9H649	340 aa	Known RBP	18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	PADI3	Q9ULW8	664 aa		18.93	■□□□□ 0.62
ZNF655-223	ENST00000493947	SMIM35	A0A1B0GVV1	85 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	ESYT2	A0FGR8	921 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	POTEB3	A0JP26	581 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	GRXCR2	A6NFK2	248 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	CYP3A4	P08684	503 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	HMGB1	P09429	215 aa	Known RBP	18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	SCG2	P13521	617 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	SLC26A2	P50443	739 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	APOBR	Q0VD83	1088 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	POTEB	Q6S5H4	581 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	MTHFD1L	Q6UB35	978 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	CELF4	Q9BZC1	486 aa	Known RBP	18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	ZMYND12	Q9H0C1	365 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947	TMX1	Q9H3N1	280 aa		18.92	■□□□□ 0.62
ZNF655-223	ENST00000493947		H3BQ06	376 aa	Predicted RBP	18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	ATP4A	P20648	1035 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	LTBR	P36941	435 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	CAMK1	Q14012	370 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	CTC1	Q2NKJ3	1217 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	JAKMIP3	Q5VZ66	844 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	FBXL16	Q8N461	479 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	TNPO1	Q92973	898 aa	Known RBP	18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	LRFN3	Q9BTN0	628 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	C11orf84	Q9BUA3	381 aa	Predicted RBP	18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	FTHL17	Q9BXU8	183 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	AGXT2	Q9BYV1	514 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	RWDD3	Q9Y3V2	267 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	SNX14	Q9Y5W7	946 aa		18.91	■□□□□ 0.62
ZNF655-223	ENST00000493947	DDX39A	O00148	427 aa	Known RBP	18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	EDIL3	O43854	480 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	HSPA4	P34932	840 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	METAP2	P50579	478 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	BTG3	Q14201	252 aa	Predicted RBP	18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	NTRK3	Q16288	839 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947		Q6ZUG5	572 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	PLA2G4D	Q86XP0	818 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	KIAA0319L	Q8IZA0	1049 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	NME8	Q8N427	588 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	ATP8B4	Q8TF62	1192 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	LMAN2L	Q9H0V9	348 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	MRPL42	Q9Y6G3	142 aa	Known RBP	18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	COL1A2	P08123	1366 aa		18.9	■□□□□ 0.62
ZNF655-223	ENST00000493947	PI4K2B	G5E9Z4	385 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	IPO5	O00410	1097 aa	Known RBP	18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	HBP1	O60381	514 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	KLRC1	P26715	233 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	KRT76	Q01546	638 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	NPAS4	Q8IUM7	802 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	CMTR2	Q8IYT2	770 aa	Known RBP	18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	TMEM40	Q8WWA1	233 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	BRF1	Q92994	677 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	LENG9	Q96B70	501 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	JAKMIP1	Q96N16	626 aa	Known RBP	18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	UIMC1	Q96RL1	719 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	CDHR5	Q9HBB8	845 aa		18.89	■□□□□ 0.61
ZNF655-223	ENST00000493947	PRPF3	O43395	683 aa	Known RBP	18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	MGEA5	O60502	916 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	MMP1	P03956	469 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	DNAJB1	P25685	340 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	ZNF76	P36508	570 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	HYAL1	Q12794	435 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	PAK2	Q13177	524 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	TMEM266	Q2M3C6	531 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	PUS10	Q3MIT2	529 aa	Known RBP	18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	GJD3	Q8N144	294 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	P2RX5	Q93086	422 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	PLVAP	Q9BX97	442 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	ERVK-5	Q9HDB9	667 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	ZNF302	Q9NR11	478 aa		18.88	■□□□□ 0.61
ZNF655-223	ENST00000493947	MAFB	Q9Y5Q3	323 aa	Predicted RBP	18.88	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms