RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 MAK16Q9BXY0 300 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 ALDH8A1Q9H2A2 487 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 NRDE2Q9H7Z3 1164 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 NKX1-2Q9UD57 310 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 DACH1Q9UI36 760 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 RBM8AQ9Y5S9 174 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 TNS1Q9HBL0 1735 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 PDE2AO00408 941 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CPLX1O14810 134 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 MGEA5O60502 916 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 DKC1O60832 514 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 DDHD2O94830 711 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 HEXIM1O94992 359 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 APOEP02649 317 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 ASLP04424 464 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 ACADSP16219 412 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 KRT9P35527 623 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 PTDSS1P48651 473 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CD97P48960 835 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CARSP49589 748 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 PDE4BQ07343 736 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 TBX2Q13207 712 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CYTH1Q15438 398 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 CCDC153Q494R4 210 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 SH3D19Q5HYK7 790 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 FOXB2Q5VYV0 432 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 KSR2Q6VAB6 950 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 UBE3BQ7Z3V4 1068 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 IFNL2Q8IZJ0 200 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 RIBC1Q8N443 379 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 RSPH1Q8WYR4 309 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 RNF25Q96BH1 459 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 HAUS4Q9H6D7 363 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 SMARCAL1Q9NZC9 954 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 STOML1Q9UBI4 398 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 MOSPD1Q9UJG1 213 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 DOLKQ9UPQ8 538 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 RBMX2Q9Y388 322 aaKnown RBP7.43□□□□□ -1.22
VPS13B-205ENST00000493587 LRRC42Q9Y546 428 aa7.43□□□□□ -1.22
VPS13B-205ENST00000493587 SRRM3A6NNA2 597 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 MFAP3LO75121 409 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 SPATA31D3P0C874 917 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 PFKFB1P16118 471 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 VARSP26640 1264 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 COPS2P61201 443 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 FOXO4P98177 505 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 MKRN4PQ13434 485 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 KIF22Q14807 665 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 SAFBQ15424 915 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 ZNF827Q17R98 1081 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 C1orf141Q5JVX7 400 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 EMC10Q5UCC4 262 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 DUS1LQ6P1R4 473 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 SPATA31D4Q6ZUB0 917 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 HS2ST1Q7LGA3 356 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 ST13P4Q8IZP2 240 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 KRI1Q8N9T8 703 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 KCNG4Q8TDN1 519 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 FBXO41Q8TF61 875 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 OLFM3Q96PB7 478 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 LRRC2Q9BYS8 371 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 CEP44Q9C0F1 390 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 SAMSN1Q9NSI8 373 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 CTNNAL1Q9UBT7 734 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 SLC12A4Q9UP95 1085 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 EPN1Q9Y6I3 576 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 CSPG5O95196 566 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 FAM153BP0C7A2 387 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 TATP17735 454 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 DRD4P21917 467 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 RNASE9P60153 205 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 RNASELQ05823 741 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 R3HDM1Q15032 1099 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 FAM153CQ494X1 144 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 EPHA10Q5JZY3 1008 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 FAM117BQ6P1L5 589 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 TAOK1Q7L7X3 1001 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 C11orf74Q86VG3 221 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 STK32AQ8WU08 396 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 ARHGEF2Q92974 986 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 FERMT2Q96AC1 680 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 GPATCH3Q96I76 525 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 SEC63Q9UGP8 760 aaKnown RBP7.42□□□□□ -1.22
VPS13B-205ENST00000493587 FAM153AQ9UHL3 310 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 EP400Q96L91 3159 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 SH3TC1Q8TE82 1336 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 NPHP3-ACAD11A0A0J9YXS1 232 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 A6NJR5 290 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 NEURL1BA8MQ27 555 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 ORC4O43929 436 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 SUN1O94901 812 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 TJP3O95049 919 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 VDRP11473 427 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 IDO1P14902 403 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 VAV1P15498 845 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 ZNF131P52739 623 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 LSAMPQ13449 338 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 ZFYVE27Q5T4F4 411 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 USPL1Q5W0Q7 1092 aa7.42□□□□□ -1.22
VPS13B-205ENST00000493587 RBBP8NLQ8NC74 664 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms