RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 RFXAPO00287 272 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 BACH1O14867 736 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 CDKL5O76039 1030 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
LRTM1-202ENST00000493075 PSAPP07602 524 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 CYP3A7P24462 503 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 LPIN1Q14693 890 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 PRR16Q569H4 304 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 ZNF484Q5JVG2 852 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 FBXO47Q5MNV8 452 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 SWSAP1Q6NVH7 229 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 PDXDC2PQ6P474 469 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 MTHFD1LQ6UB35 978 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 MYOCDQ8IZQ8 938 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 BLIDQ8IZY5 108 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 PPM1EQ8WY54 764 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
LRTM1-202ENST00000493075 RIT2Q99578 217 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
LRTM1-202ENST00000493075 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
LRTM1-202ENST00000493075 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
LRTM1-202ENST00000493075 CERS4Q9HA82 394 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 TCEAL9Q9UHQ7 104 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 CDY2AQ9Y6F7 541 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 COL1A2P08123 1366 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 TET1Q8NFU7 2136 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 EPOPA6NHQ4 379 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 PFKFB2O60825 505 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 GHRP10912 638 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 KLRC1P26715 233 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 SCRN1Q12765 414 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 STK3Q13188 491 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 CCDC85BQ15834 202 aaPredicted RBP13.02□□□□□ -0.33
LRTM1-202ENST00000493075 Q4G0T1 1027 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 FAM117BQ6P1L5 589 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 TSHZ1Q6ZSZ6 1077 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 CCDC60Q8IWA6 550 aaPredicted RBP13.02□□□□□ -0.33
LRTM1-202ENST00000493075 TBCKQ8TEA7 893 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.33
LRTM1-202ENST00000493075 SAMD11Q96NU1 681 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
LRTM1-202ENST00000493075 TPCN1Q9ULQ1 816 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 TRPV2Q9Y5S1 764 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 KDM3AQ9Y4C1 1321 aa13.02□□□□□ -0.33
LRTM1-202ENST00000493075 M0QZ92 97 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 ENPP3O14638 875 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 MSH4O15457 936 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 LPXNO60711 386 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 ATP4AP20648 1035 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 GRB10Q13322 594 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 NPY5RQ15761 445 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 MOXD1Q6UVY6 613 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 TRAPPC12Q8WVT3 735 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 SLC5A5Q92911 643 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 MBOAT7Q96N66 472 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 FTHL17Q9BXU8 183 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
LRTM1-202ENST00000493075 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
LRTM1-202ENST00000493075 SUGCTQ9HAC7 445 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
LRTM1-202ENST00000493075 TRIP12Q14669 1992 aaPredicted RBP13.01□□□□□ -0.33
LRTM1-202ENST00000493075 STK36Q9NRP7 1315 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 WDR64B1ANS9 1081 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 ZBTB42B2RXF5 422 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 XBP1P17861 261 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 SFNP31947 248 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 MRPS5P82675 430 aaKnown RBP13□□□□□ -0.33
LRTM1-202ENST00000493075 KRT25Q7Z3Z0 450 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 KIAA0319LQ8IZA0 1049 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 RDM1Q8NG50 284 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 ZBTB10Q96DT7 871 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 FAM167AQ96KS9 214 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 YME1L1Q96TA2 773 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 AGO3Q9H9G7 860 aaKnown RBP13□□□□□ -0.33
LRTM1-202ENST00000493075 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 DISC1Q9NRI5 854 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 CEP131Q9UPN4 1083 aa13□□□□□ -0.33
LRTM1-202ENST00000493075 IGSF9BQ9UPX0 1349 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 MAGEB2O15479 319 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 GAS7O60861 476 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 PSMD10O75832 226 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 UPP2O95045 317 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 JAK3P52333 1124 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 AK2P54819 239 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 NONOQ15233 471 aaKnown RBP eCLIP12.99□□□□□ -0.33
LRTM1-202ENST00000493075 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 WASF1Q92558 559 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 AIFM3Q96NN9 605 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 ASB2Q96Q27 587 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 UIMC1Q96RL1 719 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 PHF20Q9BVI0 1012 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 TEKT3Q9BXF9 490 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 NRBP2Q9NSY0 501 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 GABBR1Q9UBS5 961 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 PADI3Q9ULW8 664 aa12.99□□□□□ -0.33
LRTM1-202ENST00000493075 COG5Q9UP83 839 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms