RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MLXIPQ9HAP2 919 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 CBX8Q9HC52 389 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 PDGFCQ9NRA1 345 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 EXOC1Q9NV70 894 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 DACH1Q9UI36 760 aa15.68■□□□□ 0.1
PDZRN3-210ENST00000492909 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 RHOBTB3O94955 611 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 ATG7O95352 703 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 UGCGQ16739 394 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 CELF3Q5SZQ8 465 aaKnown RBP15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 TAPT1Q6NXT6 567 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 UNC13DQ70J99 1090 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 APBA2Q99767 749 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 KATNBL1Q9H079 304 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 GJD2Q9UKL4 321 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 RBM47A0AV96 593 aaKnown RBP15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 ZBTB39O15060 712 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 KRT18P05783 430 aaKnown RBP15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 SUPT20HL2P0C7V6 817 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 IDEP14735 1019 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 ZNF658Q5TYW1 1059 aaPredicted RBP15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 SWSAP1Q6NVH7 229 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 DHX37Q8IY37 1157 aaKnown RBP15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 DNAJC19Q96DA6 116 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 ERO1AQ96HE7 468 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 BPIFA3Q9BQP9 254 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 GTPBP4Q9BZE4 634 aaKnown RBP15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 GABBR1Q9UBS5 961 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 TELO2Q9Y4R8 837 aa15.67■□□□□ 0.1
PDZRN3-210ENST00000492909 BACH1O14867 736 aa15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 ADCY5O95622 1261 aa15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 CYP2B6P20813 491 aa15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 YWHABP31946 246 aaKnown RBP15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 KIF22Q14807 665 aa15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 ARSHQ5FYA8 562 aa15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 OLFML2BQ68BL8 750 aa15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 LUZP1Q86V48 1076 aa15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 CCDC60Q8IWA6 550 aaPredicted RBP15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 DBR1Q9UK59 544 aaKnown RBP15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.66■□□□□ 0.1
PDZRN3-210ENST00000492909 ARHGEF35A5YM69 484 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 BECN2A8MW95 431 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 NOP56O00567 594 aaKnown RBP15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 IRF5Q13568 498 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 ACVR2BQ13705 512 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 IQCB1Q15051 598 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 CT47A1Q5JQC4 288 aaPredicted RBP15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 RINT1Q6NUQ1 792 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 CCDC65Q8IXS2 484 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 SEPT1Q8WYJ6 367 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 CCDC43Q96MW1 224 aaKnown RBP15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 PRDM10Q9NQV6 1147 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 KCND2Q9NZV8 630 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 ZHX1Q9UKY1 873 aaPredicted RBP15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 TRIM17Q9Y577 477 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 MYH11P35749 1972 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 IGSF9BQ9UPX0 1349 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 ARID2Q68CP9 1835 aa15.65■□□□□ 0.1
PDZRN3-210ENST00000492909 GSTTP1A0A1W2PQM5 241 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 ADCYAP1R1P41586 468 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 RAD51AP2Q09MP3 1159 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 SMYD4Q8IYR2 804 aaPredicted RBP15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 COPS5Q92905 334 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 SPATA33Q96N06 139 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 RUSC1Q9BVN2 902 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 ZNF302Q9NR11 478 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 ANKEF1Q9NU02 776 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 PANK4Q9NVE7 773 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 FLRT1Q9NZU1 646 aa15.64■□□□□ 0.1
PDZRN3-210ENST00000492909 IGKV6D-21A0A0A0MT36 114 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 NPHP3-ACAD11A0A0J9YXS1 232 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 GOLGA6L19H0YKK7 550 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 ZNF862O60290 1169 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 GH1P01241 217 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 TCF7P36402 384 aaPredicted RBP15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 RARRES1P49788 294 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 LAMC2Q13753 1193 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 GIT2Q14161 759 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 CCL14Q16627 93 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 HSDL1Q3SXM5 330 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 IQSEC1Q6DN90 963 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 C1orf186Q6ZWK4 172 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 OTUD6AQ7L8S5 288 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 AOPEPQ8N6M6 819 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 GPR20Q99678 358 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 REEP2Q9BRK0 252 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 GABRQQ9UN88 632 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 GDAQ9Y2T3 454 aa15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 MAFBQ9Y5Q3 323 aaPredicted RBP15.64■□□□□ 0.09
PDZRN3-210ENST00000492909 PPP1R3GB7ZBB8 358 aa15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 XRCC5P13010 732 aaKnown RBP15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 ERCC5P28715 1186 aaPredicted RBP15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 PRKCEQ02156 737 aa15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 COASYQ13057 564 aa15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 PSMD2Q13200 908 aa15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 CCDC144BQ3MJ40 725 aa15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 DUSP28Q4G0W2 176 aa15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 TMEM63BQ5T3F8 832 aa15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 UTP14CQ5TAP6 766 aaKnown RBP15.63■□□□□ 0.09
PDZRN3-210ENST00000492909 FAM160B1Q5W0V3 765 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms