RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 BACH1O14867 736 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 CTDNEP1O95476 244 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 ARP10275 920 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 MBTPS1Q14703 1052 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 TCTN1Q2MV58 587 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 TRAF7Q6Q0C0 670 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 PLA2G4DQ86XP0 818 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 REXO1Q8N1G1 1221 aaKnown RBP13.31□□□□□ -0.28
GGPS1-207ENST00000489692 TSPY26PQ9H489 355 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 NCOA5Q9HCD5 579 aaKnown RBP13.31□□□□□ -0.28
GGPS1-207ENST00000489692 PRDM6Q9NQX0 595 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 NID2Q14112 1375 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 H3BQV1 296 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
GGPS1-207ENST00000489692 CAND2O75155 1236 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 UPP2O95045 317 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 GNA11P29992 359 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 SREBF1P36956 1147 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 ACTR2P61160 394 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 TAP1Q03518 808 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 FOXD4L6Q3SYB3 417 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-207ENST00000489692 TAF2Q6P1X5 1199 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 FOXD4L3Q6VB84 417 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-207ENST00000489692 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
GGPS1-207ENST00000489692 TEX2Q8IWB9 1127 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 TRIM22Q8IYM9 498 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 CCDC148Q8NFR7 591 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 BICD2Q8TD16 824 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 RAD9AQ99638 391 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 COL25A1Q9BXS0 654 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-207ENST00000489692 FAM49AQ9H0Q0 323 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-207ENST00000489692 RBSNQ9H1K0 784 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 AGO4Q9HCK5 861 aaKnown RBP13.3□□□□□ -0.28
GGPS1-207ENST00000489692 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
GGPS1-207ENST00000489692 LCHNA4D1U4 455 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 M0QZ92 97 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 GJB5O95377 273 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 GHRP10912 638 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 HOXC8P31273 242 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 STAT5BP51692 787 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 NLRP5P59047 1200 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 MCTP2Q6DN12 878 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 CPLX2Q6PUV4 134 aaKnown RBP13.29□□□□□ -0.28
GGPS1-207ENST00000489692 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 CKAP2LQ8IYA6 745 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 YME1L1Q96TA2 773 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 ZNF577Q9BSK1 485 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 VPS54Q9P1Q0 977 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 THEGQ9P2T0 379 aa13.29□□□□□ -0.28
GGPS1-207ENST00000489692 RRN3P2A6NIE6 340 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 MEIS1O00470 390 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 ARHGEF15O94989 841 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 INSRRP14616 1297 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 SSRP1Q08945 709 aaKnown RBP13.28□□□□□ -0.28
GGPS1-207ENST00000489692 ITGB3BPQ13352 177 aaPredicted RBP13.28□□□□□ -0.28
GGPS1-207ENST00000489692 UVSSAQ2YD98 709 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 PLEKHG4Q58EX7 1191 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 FAM160B1Q5W0V3 765 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 TRMT1LQ7Z2T5 733 aaKnown RBP13.28□□□□□ -0.28
GGPS1-207ENST00000489692 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 RASGRP4Q8TDF6 673 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 LEO1Q8WVC0 666 aaPredicted RBP13.28□□□□□ -0.28
GGPS1-207ENST00000489692 DNAJB3Q8WWF6 145 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 ZBTB10Q96DT7 871 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 SPATA32Q96LK8 384 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 RNF26Q9BY78 433 aaPredicted RBP13.28□□□□□ -0.28
GGPS1-207ENST00000489692 IFIH1Q9BYX4 1025 aaKnown RBP13.28□□□□□ -0.28
GGPS1-207ENST00000489692 ZMYND12Q9H0C1 365 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 INSL6Q9Y581 213 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 NFASCO94856 1347 aa13.28□□□□□ -0.28
GGPS1-207ENST00000489692 MYH6P13533 1939 aa13.27□□□□□ -0.28
GGPS1-207ENST00000489692 ESYT2A0FGR8 921 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 POTEB3A0JP26 581 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 EPOPA6NHQ4 379 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 IFNAR1P17181 557 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 IBSPP21815 317 aaPredicted RBP13.27□□□□□ -0.29
GGPS1-207ENST00000489692 CLK2P49760 499 aaKnown RBP13.27□□□□□ -0.29
GGPS1-207ENST00000489692 PLCB4Q15147 1175 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 PKN1Q16512 942 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 PRR16Q569H4 304 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 TJAP1Q5JTD0 557 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 MIS18BP1Q6P0N0 1132 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 PDXDC2PQ6P474 469 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 POTEBQ6S5H4 581 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 GDPD5Q8WTR4 605 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.29
GGPS1-207ENST00000489692 APBB2Q92870 758 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 PDLIM2Q96JY6 352 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 ZNF396Q96N95 335 aaPredicted RBP13.27□□□□□ -0.29
GGPS1-207ENST00000489692 TGS1Q96RS0 853 aaKnown RBP13.27□□□□□ -0.29
GGPS1-207ENST00000489692 PCYT2Q99447 389 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 CDY2AQ9Y6F7 541 aa13.27□□□□□ -0.29
GGPS1-207ENST00000489692 FAM86B1E9PN63 330 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 IPO5O00410 1097 aaKnown RBP13.26□□□□□ -0.29
GGPS1-207ENST00000489692 CDKL5O76039 1030 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 CHRNA1P02708 482 aa13.26□□□□□ -0.29
GGPS1-207ENST00000489692 FAM86B2P0C5J1 330 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms