RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 GSTA4O15217 222 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 MC4RP32245 332 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 ST5P78524 1137 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 TRIM61Q5EBN2 209 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 FAM47CQ5HY64 1035 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 CXXC5Q7LFL8 322 aaKnown RBP4.86□□□□□ -1.63
CPSF3-205ENST00000489629 Q8N1X5 172 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 SLC7A14Q8TBB6 771 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 MKL1Q969V6 931 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 NEIL1Q96FI4 390 aaPredicted RBP4.86□□□□□ -1.63
CPSF3-205ENST00000489629 WNK4Q96J92 1243 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 LMF1Q96S06 567 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 AMNQ9BXJ7 453 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 DEF6Q9H4E7 631 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 ARHGAP28Q9P2N2 729 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 TESMINQ9Y4I5 508 aa4.86□□□□□ -1.63
CPSF3-205ENST00000489629 KCNA6P17658 529 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 ETV4P43268 484 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 DNM2P50570 870 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 RNF151Q2KHN1 245 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 TM4SF20Q53R12 229 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 FSTL4Q6MZW2 842 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 CRIP3Q6Q6R5 217 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 NOSTRINQ8IVI9 506 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 ZC3H7AQ8IWR0 971 aaKnown RBP4.85□□□□□ -1.63
CPSF3-205ENST00000489629 IFNL2Q8IZJ0 200 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 SCLYQ96I15 445 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 DNAJC7Q99615 494 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 ZDHHC5Q9C0B5 715 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 SEMA4AQ9H3S1 761 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 INCENPQ9NQS7 918 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 NDOR1Q9UHB4 597 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 ZFR2Q9UPR6 939 aaKnown RBP4.85□□□□□ -1.63
CPSF3-205ENST00000489629 TCAF1Q9Y4C2 921 aa4.85□□□□□ -1.63
CPSF3-205ENST00000489629 PRAMEF25A6NGN4 478 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 MATN2O00339 956 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 MUSKO15146 869 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 KCNQ2O43526 872 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 EFCAB14O75071 495 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 TBR1Q16650 682 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 OVCH1Q7RTY7 1134 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 TAX1BP1Q86VP1 789 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 PALM2Q8IXS6 379 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 SLC16A11Q8NCK7 471 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 SCYL1Q96KG9 808 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 LRRC37BQ96QE4 947 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 ZNF747Q9BV97 191 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 BTBD2Q9BX70 525 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 CELF4Q9BZC1 486 aaKnown RBP4.84□□□□□ -1.63
CPSF3-205ENST00000489629 PODXL2Q9NZ53 605 aa4.84□□□□□ -1.63
CPSF3-205ENST00000489629 RASSF10A6NK89 507 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 RASGRP1O95267 797 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 C6P13671 934 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 TACR2P21452 398 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 RRADP55042 308 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 DUSP8Q13202 625 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 NFYCQ13952 458 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 NOLC1Q14978 699 aaKnown RBP eCLIP4.83□□□□□ -1.64
CPSF3-205ENST00000489629 EIF4HQ15056 248 aaKnown RBP4.83□□□□□ -1.64
CPSF3-205ENST00000489629 WDR72Q3MJ13 1102 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 ZMAT1Q5H9K5 638 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 SPDYAQ5MJ70 313 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 KANK2Q63ZY3 851 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 LRSAM1Q6UWE0 723 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 EP400NLQ6ZTU2 488 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 LARP4Q71RC2 724 aaKnown RBP eCLIP4.83□□□□□ -1.64
CPSF3-205ENST00000489629 CISD2Q8N5K1 135 aaKnown RBP4.83□□□□□ -1.64
CPSF3-205ENST00000489629 ASB15Q8WXK1 588 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 DLG3Q92796 817 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 FBXO10Q9UK96 956 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 COQ6Q9Y2Z9 468 aa4.83□□□□□ -1.64
CPSF3-205ENST00000489629 CCDC163A0A0D9SF12 145 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 SCDO00767 359 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 FSHBP01225 129 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 MMEP08473 750 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 SDHAP31040 664 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 ACVRL1P37023 503 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 ADCY8P40145 1251 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 ECE1P42892 770 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 RAC3P60763 192 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 TMEM200BQ69YZ2 307 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 TRIM68Q6AZZ1 485 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 ABHD17CQ6PCB6 329 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 Q6ZSN1 163 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 FGD2Q7Z6J4 655 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 FUKQ8N0W3 1084 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 THAP3Q8WTV1 239 aaPredicted RBP4.82□□□□□ -1.64
CPSF3-205ENST00000489629 CFHR4Q92496 578 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 MAGEB10Q96LZ2 347 aaPredicted RBP4.82□□□□□ -1.64
CPSF3-205ENST00000489629 MRPL4Q9BYD3 311 aaKnown RBP4.82□□□□□ -1.64
CPSF3-205ENST00000489629 SCAND2PQ9GZW5 306 aaPredicted RBP4.82□□□□□ -1.64
CPSF3-205ENST00000489629 UCKL1Q9NWZ5 548 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 B3GALT1Q9Y5Z6 326 aa4.82□□□□□ -1.64
CPSF3-205ENST00000489629 TCRBV16S1A1N1A0A5B0 115 aa4.81□□□□□ -1.64
CPSF3-205ENST00000489629 NPTXRO95502 500 aa4.81□□□□□ -1.64
CPSF3-205ENST00000489629 AMHP03971 560 aa4.81□□□□□ -1.64
CPSF3-205ENST00000489629 CR2P20023 1033 aa4.81□□□□□ -1.64
CPSF3-205ENST00000489629 KCNQ1P51787 676 aa4.81□□□□□ -1.64
CPSF3-205ENST00000489629 CD83Q01151 205 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms