RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 NSUN3Q9H649 340 aaKnown RBP29.59■■■□□ 2.33
RNF220-216ENST00000488865 NAP1L2Q9ULW6 460 aaPredicted RBP29.59■■■□□ 2.33
RNF220-216ENST00000488865 ESYT2A0FGR8 921 aa29.58■■■□□ 2.33
RNF220-216ENST00000488865 CYP3A4P08684 503 aa29.58■■■□□ 2.33
RNF220-216ENST00000488865 SCG2P13521 617 aa29.58■■■□□ 2.33
RNF220-216ENST00000488865 ABHD15Q6UXT9 468 aa29.58■■■□□ 2.33
RNF220-216ENST00000488865 CRYGNQ8WXF5 182 aa29.58■■■□□ 2.33
RNF220-216ENST00000488865 LMAN2LQ9H0V9 348 aa29.58■■■□□ 2.33
RNF220-216ENST00000488865 KDM3AQ9Y4C1 1321 aa29.58■■■□□ 2.33
RNF220-216ENST00000488865 IGSF9BQ9UPX0 1349 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 DGKIO75912 1065 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 CCNE2O96020 404 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 BTG3Q14201 252 aaPredicted RBP29.57■■■□□ 2.32
RNF220-216ENST00000488865 COL19A1Q14993 1142 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 PUS10Q3MIT2 529 aaKnown RBP29.57■■■□□ 2.32
RNF220-216ENST00000488865 TCEAL5Q5H9L2 206 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 JAKMIP3Q5VZ66 844 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 FAM160B1Q5W0V3 765 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 MTHFD1LQ6UB35 978 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 Q6ZUG5 572 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 PLA2G4DQ86XP0 818 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 NEK9Q8TD19 979 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 LINC01599Q8WXQ3 324 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 PABPC5Q96DU9 382 aaKnown RBP29.57■■■□□ 2.32
RNF220-216ENST00000488865 CELF4Q9BZC1 486 aaKnown RBP29.57■■■□□ 2.32
RNF220-216ENST00000488865 ZMYND12Q9H0C1 365 aa29.57■■■□□ 2.32
RNF220-216ENST00000488865 NID2Q14112 1375 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 FAM86B1E9PN63 330 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 HBP1O60381 514 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 FAM86B2P0C5J1 330 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 TMEM62Q0P6H9 643 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 APOBRQ0VD83 1088 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 FAM43BQ6ZT52 329 aaPredicted RBP29.56■■■□□ 2.32
RNF220-216ENST00000488865 RTN4RL1Q86UN2 441 aaPredicted RBP29.56■■■□□ 2.32
RNF220-216ENST00000488865 CRIPAKQ8N1N5 446 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 FBXL16Q8N461 479 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 CCDC12Q8WUD4 166 aaPredicted RBP29.56■■■□□ 2.32
RNF220-216ENST00000488865 EPHX3Q9H6B9 360 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 PADI3Q9ULW8 664 aa29.56■■■□□ 2.32
RNF220-216ENST00000488865 IGLV3-22A0A075B6J6 115 aa29.55■■■□□ 2.32
RNF220-216ENST00000488865 DDX39AO00148 427 aaKnown RBP29.55■■■□□ 2.32
RNF220-216ENST00000488865 BACH1O14867 736 aa29.55■■■□□ 2.32
RNF220-216ENST00000488865 DHX15O43143 795 aaKnown RBP29.55■■■□□ 2.32
RNF220-216ENST00000488865 PTCRAQ6ISU1 281 aaPredicted RBP29.55■■■□□ 2.32
RNF220-216ENST00000488865 FAM178BQ8IXR5 827 aa29.55■■■□□ 2.32
RNF220-216ENST00000488865 ATP8B4Q8TF62 1192 aa29.55■■■□□ 2.32
RNF220-216ENST00000488865 JAKMIP1Q96N16 626 aaKnown RBP29.55■■■□□ 2.32
RNF220-216ENST00000488865 PLVAPQ9BX97 442 aa29.55■■■□□ 2.32
RNF220-216ENST00000488865 C6orf50Q9HD87 102 aa29.55■■■□□ 2.32
RNF220-216ENST00000488865 COL1A2P08123 1366 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 IPO5O00410 1097 aaKnown RBP29.54■■■□□ 2.32
RNF220-216ENST00000488865 NCK2O43639 380 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 CPA1P15085 419 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 HSPA4P34932 840 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 KRT76Q01546 638 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 PAK2Q13177 524 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 MIS18BP1Q6P0N0 1132 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 BLOC1S2Q6QNY1 142 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 NPAS4Q8IUM7 802 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 BRF1Q92994 677 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 SNX14Q9Y5W7 946 aa29.54■■■□□ 2.32
RNF220-216ENST00000488865 GRXCR2A6NFK2 248 aa29.53■■■□□ 2.32
RNF220-216ENST00000488865 PRPF3O43395 683 aaKnown RBP29.53■■■□□ 2.32
RNF220-216ENST00000488865 KLRC1P26715 233 aa29.53■■■□□ 2.32
RNF220-216ENST00000488865 SETQ01105 290 aaPredicted RBP29.53■■■□□ 2.32
RNF220-216ENST00000488865 CCDC60Q8IWA6 550 aaPredicted RBP29.53■■■□□ 2.32
RNF220-216ENST00000488865 CMTR2Q8IYT2 770 aaKnown RBP29.53■■■□□ 2.32
RNF220-216ENST00000488865 REXO1Q8N1G1 1221 aaKnown RBP29.53■■■□□ 2.32
RNF220-216ENST00000488865 CD320Q9NPF0 282 aa29.53■■■□□ 2.32
RNF220-216ENST00000488865 ZNF302Q9NR11 478 aa29.53■■■□□ 2.32
RNF220-216ENST00000488865 LOXHD1Q8IVV2 1947 aa29.53■■■□□ 2.32
RNF220-216ENST00000488865 GRM6O15303 877 aa29.52■■■□□ 2.32
RNF220-216ENST00000488865 STAG3L1P0CL83 205 aa29.52■■■□□ 2.32
RNF220-216ENST00000488865 GNA11P29992 359 aa29.52■■■□□ 2.32
RNF220-216ENST00000488865 PKN1Q16512 942 aa29.52■■■□□ 2.32
RNF220-216ENST00000488865 ZNF484Q5JVG2 852 aa29.52■■■□□ 2.32
RNF220-216ENST00000488865 PDXDC2PQ6P474 469 aa29.52■■■□□ 2.32
RNF220-216ENST00000488865 TBC1D22BQ9NU19 505 aa29.52■■■□□ 2.32
RNF220-216ENST00000488865 IL9P15248 144 aa29.51■■■□□ 2.31
RNF220-216ENST00000488865 ZNF577Q9BSK1 485 aa29.51■■■□□ 2.31
RNF220-216ENST00000488865 AGXT2Q9BYV1 514 aa29.51■■■□□ 2.31
RNF220-216ENST00000488865 RAPGEFL1Q9UHV5 662 aa29.51■■■□□ 2.31
RNF220-216ENST00000488865 H3BQ06 376 aaPredicted RBP29.5■■■□□ 2.31
RNF220-216ENST00000488865 NAALADL2Q58DX5 795 aa29.5■■■□□ 2.31
RNF220-216ENST00000488865 ZNF746Q6NUN9 644 aaPredicted RBP29.5■■■□□ 2.31
RNF220-216ENST00000488865 SWSAP1Q6NVH7 229 aa29.5■■■□□ 2.31
RNF220-216ENST00000488865 KIAA0319LQ8IZA0 1049 aa29.5■■■□□ 2.31
RNF220-216ENST00000488865 GJD3Q8N144 294 aa29.5■■■□□ 2.31
RNF220-216ENST00000488865 KHSRPQ92945 711 aaKnown RBP eCLIP29.5■■■□□ 2.31
RNF220-216ENST00000488865 P2RX5Q93086 422 aa29.5■■■□□ 2.31
RNF220-216ENST00000488865 FAM50BQ9Y247 325 aa29.5■■■□□ 2.31
RNF220-216ENST00000488865 MYO7AQ13402 2215 aa29.49■■■□□ 2.31
RNF220-216ENST00000488865 PI4K2BG5E9Z4 385 aa29.49■■■□□ 2.31
RNF220-216ENST00000488865 ADAMTS3O15072 1205 aa29.49■■■□□ 2.31
RNF220-216ENST00000488865 MMP1P03956 469 aa29.49■■■□□ 2.31
RNF220-216ENST00000488865 RPS6KB1P23443 525 aa29.49■■■□□ 2.31
RNF220-216ENST00000488865 AKAP17AQ02040 695 aaKnown RBP29.49■■■□□ 2.31
RNF220-216ENST00000488865 SMAP1Q8IYB5 467 aaPredicted RBP29.49■■■□□ 2.31
RNF220-216ENST00000488865 BICD2Q8TD16 824 aa29.49■■■□□ 2.31
RNF220-216ENST00000488865 LRFN3Q9BTN0 628 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms