RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 SMPD1P17405 629 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 SCP2P22307 547 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 YWHABP31946 246 aaKnown RBP11.92□□□□□ -0.5
USP11-209ENST00000488848 FLT3LGP49771 235 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 RTP1P59025 263 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 CYP4A11Q02928 519 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 PRKCZQ05513 592 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 PSMD2Q13200 908 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 GRM1Q13255 1194 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 CTTNQ14247 550 aaKnown RBP11.92□□□□□ -0.5
USP11-209ENST00000488848 MCM6Q14566 821 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 GSE1Q14687 1217 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 TARBP2Q15633 366 aaKnown RBP11.92□□□□□ -0.5
USP11-209ENST00000488848 UGCGQ16739 394 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 LY6KQ17RY6 165 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 HSDL1Q3SXM5 330 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 FAM160B1Q5W0V3 765 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 RINT1Q6NUQ1 792 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 ANO5Q75V66 913 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 GAS2L3Q86XJ1 694 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 GRAMD1CQ8IYS0 662 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 DNAJC5GQ8N7S2 189 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 FAM200AQ8TCP9 573 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 TRIB2Q92519 343 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 DDX12PQ92771 950 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
USP11-209ENST00000488848 UPF3AQ9H1J1 476 aaKnown RBP11.92□□□□□ -0.5
USP11-209ENST00000488848 BHMT2Q9H2M3 363 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 BCAS3Q9H6U6 928 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 PDLIM7Q9NR12 457 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 PDGFCQ9NRA1 345 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
USP11-209ENST00000488848 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 SEL1LQ9UBV2 794 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 IKBKBO14920 756 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 ATP4AP20648 1035 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 ERCC5P28715 1186 aaPredicted RBP11.91□□□□□ -0.5
USP11-209ENST00000488848 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 AFMP43652 599 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 PRKCEQ02156 737 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 CCL14Q16627 93 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 ZNF658Q5TYW1 1059 aaPredicted RBP11.91□□□□□ -0.5
USP11-209ENST00000488848 MFSD14CQ5VZR4 134 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 OTUD6AQ7L8S5 288 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 TPH2Q8IWU9 490 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 DHX37Q8IY37 1157 aaKnown RBP11.91□□□□□ -0.5
USP11-209ENST00000488848 BANK1Q8NDB2 785 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 ST6GALNAC4Q9H4F1 302 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 MLXIPQ9HAP2 919 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 C17orf75Q9HAS0 396 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 ZNF302Q9NR11 478 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 GABBR1Q9UBS5 961 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 PCDHA2Q9Y5H9 948 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 COL1A2P08123 1366 aa11.91□□□□□ -0.5
USP11-209ENST00000488848 SCN10AQ9Y5Y9 1956 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 DDX39AO00148 427 aaKnown RBP11.9□□□□□ -0.5
USP11-209ENST00000488848 ADCY6O43306 1168 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 GAS2O43903 313 aaKnown RBP11.9□□□□□ -0.5
USP11-209ENST00000488848 DUSP11O75319 330 aaKnown RBP11.9□□□□□ -0.5
USP11-209ENST00000488848 DGAT1O75907 488 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 HMGCRP04035 888 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 OATP04181 439 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 MAPTP10636 758 aaKnown RBP11.9□□□□□ -0.5
USP11-209ENST00000488848 AKR1A1P14550 325 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 GAP43P17677 238 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 CYP2B6P20813 491 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 TCF7P36402 384 aaPredicted RBP11.9□□□□□ -0.5
USP11-209ENST00000488848 HTRA3P83110 453 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 TNFAIP2Q03169 654 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 MAPK7Q13164 816 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 GIT2Q14161 759 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 IQCB1Q15051 598 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 BMT2Q1RMZ1 405 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 EEPD1Q7L9B9 569 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 GPBP1Q86WP2 473 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 EXOC8Q8IYI6 725 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 ATP8B4Q8TF62 1192 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 ZNF296Q8WUU4 475 aaPredicted RBP11.9□□□□□ -0.5
USP11-209ENST00000488848 TMEM174Q8WUU8 243 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
USP11-209ENST00000488848 SPATA33Q96N06 139 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 RUSC1Q9BVN2 902 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 NAT10Q9H0A0 1025 aaKnown RBP11.9□□□□□ -0.5
USP11-209ENST00000488848 SMARCAD1Q9H4L7 1026 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 FAM184BQ9ULE4 1060 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 GABRQQ9UN88 632 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 TELO2Q9Y4R8 837 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 SAMM50Q9Y512 469 aa11.9□□□□□ -0.5
USP11-209ENST00000488848 UBE4BO95155 1302 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 CENPFP49454 3210 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 MYH11P35749 1972 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 IGKV6-21A0A0C4DH24 114 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
USP11-209ENST00000488848 NOP56O00567 594 aaKnown RBP11.89□□□□□ -0.51
USP11-209ENST00000488848 SEPT4O43236 478 aa11.89□□□□□ -0.51
USP11-209ENST00000488848 F2P00734 622 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms