RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FNTBP49356 437 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 SMAD2Q15796 467 aaKnown RBP6.15□□□□□ -1.42
ITGB1-214ENST00000488427 VWA3BQ502W6 1294 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 TM4SF20Q53R12 229 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 CC2D1AQ6P1N0 951 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-214ENST00000488427 BORAQ6PGQ7 559 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 NOSTRINQ8IVI9 506 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 RBM12BQ8IXT5 1001 aaKnown RBP6.15□□□□□ -1.42
ITGB1-214ENST00000488427 DHX37Q8IY37 1157 aaKnown RBP6.15□□□□□ -1.42
ITGB1-214ENST00000488427 ZZZ3Q8IYH5 903 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 NOX5Q96PH1 765 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 USP40Q9NVE5 1235 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 CYP1A1P04798 512 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-214ENST00000488427 KCNA6P17658 529 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 PTGS1P23219 599 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 GYS2P54840 703 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 PFKPQ01813 784 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 ADCY1Q08828 1119 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 ADAM9Q13443 819 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 ZNF460Q14592 562 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 CT47A1Q5JQC4 288 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-214ENST00000488427 ABHD17CQ6PCB6 329 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 TRMT10BQ6PF06 316 aaKnown RBP6.14□□□□□ -1.43
ITGB1-214ENST00000488427 CXXC5Q7LFL8 322 aaKnown RBP6.14□□□□□ -1.43
ITGB1-214ENST00000488427 HIPK4Q8NE63 616 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 TMEM168Q9H0V1 697 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 BARX1Q9HBU1 254 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-214ENST00000488427 TELO2Q9Y4R8 837 aa6.14□□□□□ -1.43
ITGB1-214ENST00000488427 FAM90A27PA6NNH2 459 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 ACOT7O00154 380 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 FFAR3O14843 346 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 KPNA6O60684 536 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 KRT37O76014 449 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 C4BPAP04003 597 aaKnown RBP6.13□□□□□ -1.43
ITGB1-214ENST00000488427 MYCLP1P12525 358 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-214ENST00000488427 AOAHP28039 575 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 MECP2P51608 486 aaKnown RBP6.13□□□□□ -1.43
ITGB1-214ENST00000488427 KIF11P52732 1056 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 MAP3K12Q12852 859 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 TMEM132BQ14DG7 1078 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 PLEKHH3Q7Z736 793 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 DLG3Q92796 817 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 LCORQ96JN0 433 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-214ENST00000488427 INCENPQ9NQS7 918 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 ZFP69BQ9UJL9 534 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 WDR62O43379 1518 aa6.13□□□□□ -1.43
ITGB1-214ENST00000488427 H0Y858 1186 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 PDE8AO60658 829 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 CUTAO60888 179 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 IL13P35225 146 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 SLURP1P55000 103 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 C21orf62-AS1Q17RA5 79 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 ZNF568Q3ZCX4 644 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 RNF187Q5TA31 235 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-214ENST00000488427 CPZQ66K79 652 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 IFNL2Q8IZJ0 200 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 ADAMTS17Q8TE56 1095 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 ZNF526Q8TF50 670 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-214ENST00000488427 CHAC2Q8WUX2 184 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 ZSWIM3Q96MP5 696 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 GBP4Q96PP9 640 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 SPATA6Q9NWH7 488 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-214ENST00000488427 GALNT8Q9NY28 637 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
ITGB1-214ENST00000488427 HECW2Q9P2P5 1572 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 KCNK3O14649 394 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 FOXD2O60548 495 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-214ENST00000488427 F2P00734 622 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 ZNF28P17035 718 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 KPNA1P52294 538 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-214ENST00000488427 SURF1Q15526 300 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 DDX46Q7L014 1031 aaKnown RBP6.11□□□□□ -1.43
ITGB1-214ENST00000488427 STK32CQ86UX6 486 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 PROSER1Q86XN7 944 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 REXO1L1PQ8IX06 675 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 EFHBQ8N7U6 833 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 KIAA1958Q8N8K9 716 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 MARCH10Q8NA82 808 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-214ENST00000488427 TARS2Q9BW92 718 aaKnown RBP6.11□□□□□ -1.43
ITGB1-214ENST00000488427 BTBD2Q9BX70 525 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 CAAP1Q9H8G2 361 aa6.11□□□□□ -1.43
ITGB1-214ENST00000488427 NCAPD3P42695 1498 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 MRC2Q9UBG0 1479 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 DISP3Q9P2K9 1392 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 A0A0G2JLL6 359 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-214ENST00000488427 TRAF5O00463 557 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 DDX3XO00571 662 aaKnown RBP eCLIP6.1□□□□□ -1.43
ITGB1-214ENST00000488427 MMEP08473 750 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 SYN1P17600 705 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 GLRBP48167 497 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 IL2P60568 153 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 ROM1Q03395 351 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 EPHA7Q15375 998 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 DHCR24Q15392 516 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 RGL3Q3MIN7 710 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 WDR72Q3MJ13 1102 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 PRR31Q5SQ13 230 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 TIGD7Q6NT04 549 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-214ENST00000488427 LGI4Q8N135 537 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 KLHL36Q8N4N3 616 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms