RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TUFT1Q9NNX1 390 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 PARP2Q9UGN5 583 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 FEZ2Q9UHY8 353 aaPredicted RBP12.84□□□□□ -0.35
TRA2B-214ENST00000487615 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 CD19P15391 556 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 PEX3P56589 373 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 CCDC91Q7Z6B0 441 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 ZBTB8OSQ8IWT0 167 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 DNAJC12Q9UKB3 198 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 P4HBP07237 508 aaKnown RBP12.84□□□□□ -0.35
TRA2B-214ENST00000487615 BMP6P22004 513 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 RPA1P27694 616 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 JAK3P52333 1124 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 MESDQ14696 234 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 SUPT20HL1Q3ZLR7 823 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 ZNF710Q8N1W2 664 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 ANKS4BQ8N8V4 417 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 FAM151AQ8WW52 585 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 NRBP2Q9NSY0 501 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 IVNS1ABPQ9Y6Y0 642 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 PITPNM2Q9BZ72 1349 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 VEGFAP15692 232 aaPredicted RBP12.84□□□□□ -0.35
TRA2B-214ENST00000487615 PTK2Q05397 1052 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 FUT2Q10981 343 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 EPHA7Q15375 998 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 B4GALNT4Q76KP1 1039 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 REEP2Q9BRK0 252 aa12.84□□□□□ -0.35
TRA2B-214ENST00000487615 PHRF1Q9P1Y6 1649 aaKnown RBP12.83□□□□□ -0.35
TRA2B-214ENST00000487615 WDR64B1ANS9 1081 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 RNF40O75150 1001 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 ATP2C2O75185 946 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 NCAPG2Q86XI2 1143 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 SULF1Q8IWU6 871 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 FERMT1Q9BQL6 677 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 STIM2Q9P246 746 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 COL14A1Q05707 1796 aaKnown RBP12.83□□□□□ -0.36
TRA2B-214ENST00000487615 SSU72P8A0A1W2PR75 194 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 NEBLO76041 1014 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 QARSP47897 775 aaKnown RBP12.83□□□□□ -0.36
TRA2B-214ENST00000487615 BPIFB4P59827 614 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
TRA2B-214ENST00000487615 DDR1Q08345 913 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 E2F4Q16254 413 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 OSBPL9Q96SU4 736 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 RABEP2Q9H5N1 569 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 SUGCTQ9HAC7 445 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 ZNRF3Q9ULT6 936 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 AGTPBP1Q9UPW5 1226 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 A0A1W2PQJ5 194 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 SLC7A5Q01650 507 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 EVX2Q03828 476 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 TERF2Q15554 542 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 RSBN1LQ6PCB5 846 aaPredicted RBP12.83□□□□□ -0.36
TRA2B-214ENST00000487615 GADL1Q6ZQY3 521 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 CCDC121Q6ZUS5 278 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 XXYLT1Q8NBI6 393 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 VCPKMTQ9H867 229 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 ANKFY1Q9P2R3 1169 aa12.83□□□□□ -0.36
TRA2B-214ENST00000487615 ZNF70Q9UC06 446 aaPredicted RBP12.83□□□□□ -0.36
TRA2B-214ENST00000487615 PSAPP07602 524 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 NSFP46459 744 aaKnown RBP12.82□□□□□ -0.36
TRA2B-214ENST00000487615 ERVK-24P63145 666 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 KRT76Q01546 638 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 MIS18BP1Q6P0N0 1132 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 CEP128Q6ZU80 1094 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 C10orf67Q8IYJ2 551 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 TRIM10Q9UDY6 481 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-214ENST00000487615 GAKO14976 1311 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 KRT19P08727 400 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 ATP5DP30049 168 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 SHMT1P34896 483 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 RHBDL3P58872 404 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 NFRKBQ6P4R8 1299 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 EXOC4Q96A65 974 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 ZNF653Q96CK0 615 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 PAIP2Q9BPZ3 127 aaKnown RBP12.82□□□□□ -0.36
TRA2B-214ENST00000487615 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-214ENST00000487615 ABCD1P33897 745 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 KLK7P49862 253 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 SPP2Q13103 211 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 FAM160B1Q5W0V3 765 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 EMBQ6PCB8 327 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 APBB1IPQ7Z5R6 666 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-214ENST00000487615 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-214ENST00000487615 KCNK9Q9NPC2 374 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 GOLGA8IPA6NC78 632 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 GOLGA8JA6NMD2 632 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 TBX2Q13207 712 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-214ENST00000487615 MTERF2Q49AM1 385 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 ARHGAP27Q6ZUM4 889 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
TRA2B-214ENST00000487615 RNF146Q9NTX7 359 aa12.82□□□□□ -0.36
TRA2B-214ENST00000487615 NMT1P30419 496 aaKnown RBP12.81□□□□□ -0.36
TRA2B-214ENST00000487615 PIK3CAP42336 1068 aa12.81□□□□□ -0.36
TRA2B-214ENST00000487615 GNGT1P63211 74 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms