RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ATP1A2P50993 1020 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 OSTNP61366 133 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 GABPB1Q06547 395 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-216ENST00000486741 TTI2Q6NXR4 508 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 FAM151AQ8WW52 585 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 RPGRIP1Q96KN7 1286 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 ACCSQ96QU6 501 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 SEMA6BQ9H3T3 888 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 DNAJC12Q9UKB3 198 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 LRRC37A3O60309 1634 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 SLC9A1P19634 815 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 FXR2P51116 673 aaKnown RBP eCLIP14.41□□□□□ -0.14e-20■□□□□ 8.5
HMGN1-216ENST00000486741 PSMC6P62333 389 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 NAALADL2Q58DX5 795 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 ZNF746Q6NUN9 644 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 PROM2Q8N271 834 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 UBL4BQ8N7F7 174 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 GLIS3Q8NEA6 775 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 TSKSQ9UJT2 592 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 MXI1P50539 228 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 USP14P54578 494 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 MAP2K1Q02750 393 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 PAK2Q13177 524 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 ORC2Q13416 577 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 CDKAL1Q5VV42 579 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 SAAL1Q96ER3 474 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 RPAP3Q9H6T3 665 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 VCPKMTQ9H867 229 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 CNOT7Q9UIV1 285 aaKnown RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 UTP11Q9Y3A2 253 aaKnown RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 IVNS1ABPQ9Y6Y0 642 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 HEXIM1O94992 359 aaKnown RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 CALCOCO2Q13137 446 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 E2F4Q16254 413 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 ELOA2Q8IYF1 753 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 ATP6V0A1Q93050 837 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 FAM163AQ96GL9 167 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-216ENST00000486741 FAN1Q9Y2M0 1017 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 ESYT3A0FGR9 886 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 MSH4O15457 936 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 STYK1Q6J9G0 422 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 SYCE1Q8N0S2 351 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 CEP72Q9P209 647 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 ASIC3Q9UHC3 531 aa14.41□□□□□ -0.1
HMGN1-216ENST00000486741 FERP16591 822 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 SMARCA1P28370 1054 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 CC2D1AQ6P1N0 951 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-216ENST00000486741 HOOK3Q86VS8 718 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 DESP17661 470 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 R3HDM1Q15032 1099 aaKnown RBP14.4□□□□□ -0.1
HMGN1-216ENST00000486741 DACT2Q5SW24 774 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 CYFIP1Q7L576 1253 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 CEP63Q96MT8 703 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 GOLPH3Q9H4A6 298 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 C1orf112Q9NSG2 853 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 CEP83Q9Y592 693 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 HIP1RO75146 1068 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 GTF2A1P52655 376 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-216ENST00000486741 APBA1Q02410 837 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 NT5DC1Q5TFE4 455 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 SWSAP1Q6NVH7 229 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 DCUN1D2Q6PH85 259 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 KIAA0895Q8NCT3 520 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 SLC7A3Q8WY07 619 aa14.4□□□□□ -0.1
HMGN1-216ENST00000486741 TYW1Q9NV66 732 aaKnown RBP14.4□□□□□ -0.1
HMGN1-216ENST00000486741 MYZAPP0CAP1 466 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 CYP11B2P19099 503 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 BAATQ14032 418 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-216ENST00000486741 DNAAF5Q86Y56 855 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 FMNL3Q8IVF7 1028 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 GABBR1Q9UBS5 961 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 FZD1Q9UP38 647 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 MAP3K9P80192 1104 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 CASP8Q14790 479 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 PROCA1Q8NCQ7 364 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-216ENST00000486741 ANKS1AQ92625 1134 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 PNMA5Q96PV4 448 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 MMS19Q96T76 1030 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 EIF3CLB5ME19 914 aaKnown RBP14.39□□□□□ -0.11
HMGN1-216ENST00000486741 EYA4O95677 639 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 QARSP47897 775 aaKnown RBP14.39□□□□□ -0.11
HMGN1-216ENST00000486741 TAB3Q8N5C8 712 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-216ENST00000486741 EIF3CQ99613 913 aaKnown RBP14.39□□□□□ -0.11
HMGN1-216ENST00000486741 FAM198AQ9UFP1 575 aa14.39□□□□□ -0.11
HMGN1-216ENST00000486741 SRGAP2CP0DJJ0 459 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 KCNJ6P48051 423 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 CRY2Q49AN0 593 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 CEP85LQ5SZL2 805 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 SH3RF1Q7Z6J0 888 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 GLYCTKQ8IVS8 523 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 NT5C1BQ96P26 610 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 BZW2Q9Y6E2 419 aaKnown RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 FAM237AA0A1B0GTK4 181 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 SPDYE2BA6NHP3 402 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 INO80B-WBP1J3KQ70 363 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 CTIFO43310 598 aaKnown RBP14.38□□□□□ -0.11
HMGN1-216ENST00000486741 SPDYE6P0CI01 402 aa14.38□□□□□ -0.11
HMGN1-216ENST00000486741 CCND2P30279 289 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms