RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 FBRSQ9HAH7 460 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 GP6Q9HCN6 339 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 LUC7LQ9NQ29 371 aaKnown RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 CYP26B1Q9NR63 512 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 DIAPH3Q9NSV4 1193 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 COMMD8Q9NX08 183 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 DCAF16Q9NXF7 216 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 PGAP2Q9UHJ9 254 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 ADAMTS6Q9UKP5 1117 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 PNMA8BQ9ULN7 279 aaPredicted RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 NOB1Q9ULX3 412 aaKnown RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 TTLL3Q9Y4R7 772 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 MORC2Q9Y6X9 1032 aaPredicted RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 RAD54L2Q9Y4B4 1467 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 NBNO60934 754 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 BAIAP3O94812 1187 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 KIAA0754O94854 1291 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 RHOBTB3O94955 611 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 TSPAN15O95858 294 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 HTR3AP46098 478 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 CCT5P48643 541 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 TRPC1P48995 793 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 TPD52P55327 224 aaPredicted RBP5.19□□□□□ -1.58
RTN4-213ENST00000485749 TMPRSS15P98073 1019 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 ZP2Q05996 745 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 CHAF1AQ13111 956 aaPredicted RBP5.19□□□□□ -1.58
RTN4-213ENST00000485749 TBX2Q13207 712 aaPredicted RBP5.19□□□□□ -1.58
RTN4-213ENST00000485749 SLBPQ14493 270 aaKnown RBP eCLIP5.19□□□□□ -1.58
RTN4-213ENST00000485749 SLC9A5Q14940 896 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 SART3Q15020 963 aaKnown RBP5.19□□□□□ -1.58
RTN4-213ENST00000485749 SLC35F1Q5T1Q4 408 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 MFSD4BQ5TF39 518 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 GTF2IRD2BQ6EKJ0 949 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 STYK1Q6J9G0 422 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 ZNF449Q6P9G9 518 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 C1orf228Q6PIY5 440 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 DDX53Q86TM3 631 aaKnown RBP5.19□□□□□ -1.58
RTN4-213ENST00000485749 GTF2IRD2Q86UP8 949 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 MFSD2AQ8NA29 543 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 NUP133Q8WUM0 1156 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 DCAF4Q8WV16 495 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 ISL2Q96A47 359 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 VWCEQ96DN2 955 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 ZFYVE21Q9BQ24 234 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 ELAC2Q9BQ52 826 aaKnown RBP5.19□□□□□ -1.58
RTN4-213ENST00000485749 CCDC94Q9BW85 323 aaPredicted RBP5.19□□□□□ -1.58
RTN4-213ENST00000485749 NKX2-4Q9H2Z4 354 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 PLCB1Q9NQ66 1216 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 OBP2AQ9NY56 170 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 LMCD1Q9NZU5 365 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 ANKRD6Q9Y2G4 727 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 FHOD1Q9Y613 1164 aa5.19□□□□□ -1.58
RTN4-213ENST00000485749 A6NCN8 305 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 TMEM110-MUSTN1A8MSY1 372 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 K7ENM7 598 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 SHOXO15266 292 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 TBX1O43435 398 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 PIP5K1CO60331 668 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 ULK1O75385 1050 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 LEFTY1O75610 366 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 SETSIPP0DME0 302 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 PHKG2P15735 406 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 VCAM1P19320 739 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 OCRLQ01968 901 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 NTRK3Q16288 839 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 MLANAQ16655 118 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 INAVAQ3KP66 663 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 MINDY4Q4G0A6 757 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 RILPL1Q5EBL4 403 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 TMEM240Q5SV17 173 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 MPZL3Q6UWV2 235 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 RSPO2Q6UXX9 243 aaPredicted RBP5.18□□□□□ -1.58
RTN4-213ENST00000485749 BTN2A1Q7KYR7 527 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 TEX9Q8N6V9 391 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 BTN2A2Q8WVV5 523 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 FOXQ1Q9C009 403 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 MKRN2Q9H000 416 aaKnown RBP5.18□□□□□ -1.58
RTN4-213ENST00000485749 CRTAC1Q9NQ79 661 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 FAM86C1Q9NVL1 165 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 CGGBP1Q9UFW8 167 aaPredicted RBP5.18□□□□□ -1.58
RTN4-213ENST00000485749 PLAGL2Q9UPG8 496 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 RRP15Q9Y3B9 282 aaKnown RBP5.18□□□□□ -1.58
RTN4-213ENST00000485749 IPPQ9Y573 584 aa5.18□□□□□ -1.58
RTN4-213ENST00000485749 MAGED1Q9Y5V3 778 aaPredicted RBP5.18□□□□□ -1.58
RTN4-213ENST00000485749 WRNQ14191 1432 aaPredicted RBP eCLIP5.17□□□□□ -1.58
RTN4-213ENST00000485749 ANO9A1A5B4 782 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 TRIM64A6NGJ6 449 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 TRIM64BA6NI03 449 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 C19orf81C9J6K1 198 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 CTAGE5O15320 804 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 KCNH1O95259 989 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 IPO7O95373 1038 aaKnown RBP5.17□□□□□ -1.58
RTN4-213ENST00000485749 ARIH2O95376 493 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 CRTAMO95727 393 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 MSL3P1P0C860 447 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 ATF7P17544 494 aaPredicted RBP5.17□□□□□ -1.58
RTN4-213ENST00000485749 KCNA6P17658 529 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 GRK2P25098 689 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 ABCD1P33897 745 aa5.17□□□□□ -1.58
RTN4-213ENST00000485749 CTNNA1P35221 906 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms