RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 TMEM253P0C7T8 217 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 DBPQ10586 325 aaPredicted RBP6.87□□□□□ -1.31
SRRM1-213ENST00000485441 RGL3Q3MIN7 710 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 NME9Q86XW9 330 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 FAM126BQ8IXS8 530 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 CHPFQ8IZ52 775 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 KIRREL1Q96J84 757 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 GBP4Q96PP9 640 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 MSRAQ9UJ68 235 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 PLA2G2DQ9UNK4 145 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 WASF3Q9UPY6 502 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 ASB1Q9Y576 335 aa6.87□□□□□ -1.31
SRRM1-213ENST00000485441 WASHC2AQ641Q2 1341 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 PRAMEF25A6NGN4 478 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 PRPF3O43395 683 aaKnown RBP6.86□□□□□ -1.31
SRRM1-213ENST00000485441 KDM1AO60341 852 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 CFBP00751 764 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 ZSCAN20P17040 1043 aaPredicted RBP6.86□□□□□ -1.31
SRRM1-213ENST00000485441 FBLN1P23142 703 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 AOAHP28039 575 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 RAB3GAP1Q15042 981 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 CR1LQ2VPA4 569 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 PLEKHN1Q494U1 663 aaPredicted RBP6.86□□□□□ -1.31
SRRM1-213ENST00000485441 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 ZMYM1Q5SVZ6 1142 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 NXNQ6DKJ4 435 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 PGM2L1Q6PCE3 622 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 ATG4DQ86TL0 474 aaPredicted RBP6.86□□□□□ -1.31
SRRM1-213ENST00000485441 CILP2Q8IUL8 1156 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 TCEAL8Q8IYN2 117 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 CPA6Q8N4T0 437 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 RELTQ969Z4 430 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 BCAS3Q9H6U6 928 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 DTLQ9NZJ0 730 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 ZNF180Q9UJW8 692 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 TMPRSS11EQ9UL52 423 aa6.86□□□□□ -1.31
SRRM1-213ENST00000485441 NFIBO00712 420 aa6.85□□□□□ -1.31
SRRM1-213ENST00000485441 MANFP55145 182 aaKnown RBP6.85□□□□□ -1.31
SRRM1-213ENST00000485441 GP2P55259 537 aaKnown RBP6.85□□□□□ -1.31
SRRM1-213ENST00000485441 FSCN1Q16658 493 aaKnown RBP6.85□□□□□ -1.31
SRRM1-213ENST00000485441 ADGRF1Q5T601 910 aa6.85□□□□□ -1.31
SRRM1-213ENST00000485441 FAM102BQ5T8I3 360 aa6.85□□□□□ -1.31
SRRM1-213ENST00000485441 KANSL1Q7Z3B3 1105 aa6.85□□□□□ -1.31
SRRM1-213ENST00000485441 KCNK18Q7Z418 384 aa6.85□□□□□ -1.31
SRRM1-213ENST00000485441 CXorf67Q86X51 503 aaPredicted RBP6.85□□□□□ -1.31
SRRM1-213ENST00000485441 JPH3Q8WXH2 748 aaPredicted RBP6.85□□□□□ -1.31
SRRM1-213ENST00000485441 ACAP3Q96P50 834 aa6.85□□□□□ -1.31
SRRM1-213ENST00000485441 SLC52A1Q9NWF4 448 aa6.85□□□□□ -1.31
SRRM1-213ENST00000485441 IP6K2Q9UHH9 426 aa6.85□□□□□ -1.31
SRRM1-213ENST00000485441 LUC7L2Q9Y383 392 aaKnown RBP6.85□□□□□ -1.31
SRRM1-213ENST00000485441 IRS2Q9Y4H2 1338 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 RECQLP46063 649 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-213ENST00000485441 CD276Q5ZPR3 534 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 TEPPQ6URK8 271 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 C14orf80Q86SX3 495 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 AMIGO3Q86WK7 504 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 IRF2BP1Q8IU81 584 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 LYSMD2Q8IV50 215 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 CMTR2Q8IYT2 770 aaKnown RBP6.84□□□□□ -1.31
SRRM1-213ENST00000485441 MYO1HQ8N1T3 1032 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 TTC8Q8TAM2 541 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 TOE1Q96GM8 510 aaKnown RBP6.84□□□□□ -1.31
SRRM1-213ENST00000485441 MAML3Q96JK9 1138 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 AMNQ9BXJ7 453 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 SLC6A17Q9H1V8 727 aa6.84□□□□□ -1.31
SRRM1-213ENST00000485441 ZNF552Q9H707 407 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-213ENST00000485441 ZNF277Q9NRM2 450 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-213ENST00000485441 CCM2LQ9NUG4 571 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-213ENST00000485441 DBR1Q9UK59 544 aaKnown RBP6.84□□□□□ -1.31
SRRM1-213ENST00000485441 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
SRRM1-213ENST00000485441 PRSS38A1L453 326 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 PRAMEF22A3QJZ6 481 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 OR14I1A6ND48 311 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.83□□□□□ -1.32
SRRM1-213ENST00000485441 HRKO00198 91 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 ZRANB2O95218 330 aaKnown RBP eCLIP6.83□□□□□ -1.32
SRRM1-213ENST00000485441 MTNR1BP49286 362 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 MYBPC3Q14896 1274 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 CT83Q5H943 113 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 ZBTB41Q5SVQ8 909 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 ARTNQ5T4W7 220 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 PRAMEF18Q5VWM3 479 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 ZC3H14Q6PJT7 736 aaKnown RBP6.83□□□□□ -1.32
SRRM1-213ENST00000485441 PHYKPLQ8IUZ5 450 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 SLC41A1Q8IVJ1 513 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 TGFBRAP1Q8WUH2 860 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 CPA5Q8WXQ8 436 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 ANO3Q9BYT9 981 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 PRDM12Q9H4Q4 367 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 LUC7LQ9NQ29 371 aaKnown RBP6.83□□□□□ -1.32
SRRM1-213ENST00000485441 MKS1Q9NXB0 559 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 PPP2R3BQ9Y5P8 575 aa6.83□□□□□ -1.32
SRRM1-213ENST00000485441 ABLIM1O14639 778 aa6.82□□□□□ -1.32
SRRM1-213ENST00000485441 KIF3BO15066 747 aa6.82□□□□□ -1.32
SRRM1-213ENST00000485441 PRPF6O94906 941 aaKnown RBP6.82□□□□□ -1.32
SRRM1-213ENST00000485441 SNUPNO95149 360 aaKnown RBP6.82□□□□□ -1.32
SRRM1-213ENST00000485441 PRLP01236 227 aa6.82□□□□□ -1.32
SRRM1-213ENST00000485441 GLI1P08151 1106 aa6.82□□□□□ -1.32
SRRM1-213ENST00000485441 ENPP1P22413 925 aa6.82□□□□□ -1.32
SRRM1-213ENST00000485441 CCND1P24385 295 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms