RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 HSPA9P38646 679 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 RNF220Q5VTB9 566 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 ANKS4BQ8N8V4 417 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 FAM84BQ96KN1 310 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 ABCF3Q9NUQ8 709 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 BARHL2Q9NY43 387 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 ADAM22Q9P0K1 906 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 GGT7Q9UJ14 662 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 NFS1Q9Y697 457 aa12.61□□□□□ -0.39
SEC61A1-205ENST00000483956 MYH10P35580 1976 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 ZPR1O75312 459 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 KRT16P08779 473 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 MAGOHP61326 146 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 NCALDP61601 193 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 ASIC1P78348 528 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 AMPD3Q01432 767 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 MECOMQ03112 1051 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 MYBPC3Q14896 1274 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 VWA3BQ502W6 1294 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC178Q5BJE1 867 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 WHAMMQ8TF30 809 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 MAGOHBQ96A72 148 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 PSMD1Q99460 953 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC88AQ3V6T2 1871 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 HOXA7P31268 230 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 UAP1Q16222 522 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 IFI16Q16666 785 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 TRPM8Q7Z2W7 1104 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 C2CD5Q86YS7 1000 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 PLIN2Q99541 437 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 RNF14Q9UBS8 474 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 MAD2L2Q9UI95 211 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 TSKSQ9UJT2 592 aa12.6□□□□□ -0.39
SEC61A1-205ENST00000483956 CYP2D6P10635 497 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 EIF4A3P38919 411 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 CCNG1P51959 295 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 TMEM62Q0P6H9 643 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 TXNRD1Q16881 649 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 FBXO33Q7Z6M2 555 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 RNF10Q8N5U6 811 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 RPS6KC1Q96S38 1066 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 EDEM3Q9BZQ6 932 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 WNK3Q9BYP7 1800 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 CTNND1O60716 968 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 UBOX5O94941 541 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 OATP04181 439 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 FCER1AP12319 257 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 CTNNA1P35221 906 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 PCK1P35558 622 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 MRPS35P82673 323 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 CCDC38Q502W7 563 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 ACBD5Q5T8D3 534 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 TRIM42Q8IWZ5 723 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 STAG2Q8N3U4 1231 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 BICD1Q96G01 975 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 XPO6Q96QU8 1125 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 ROBO3Q96MS0 1386 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 RARAP10276 462 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 RFC5P40937 340 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 DNA2P51530 1060 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 ORC2Q13416 577 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 BIRC3Q13489 604 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 SLC35G1Q2M3R5 365 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 ASTE1Q2TB18 679 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 TMEM154Q6P9G4 183 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 FOXR2Q6PJQ5 311 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 SDCCAG8Q86SQ7 713 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 EEF2KMTQ96G04 330 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 KRT12Q99456 494 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 YIPF2Q9BWQ6 316 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 ECT2Q9H8V3 914 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 AFF2P51816 1311 aa12.59□□□□□ -0.39
SEC61A1-205ENST00000483956 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.39
SEC61A1-205ENST00000483956 SSU72P8A0A1W2PR75 194 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 EPHB6O15197 1021 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 CREB3O43889 395 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 SF3B3Q15393 1217 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 DBN1Q16643 649 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 KRT25Q7Z3Z0 450 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 MAIP1Q8WWC4 291 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 BAP1Q92560 729 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 TLR10Q9BXR5 811 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 SWAP70Q9UH65 585 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 ZMYND8Q9ULU4 1186 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms