RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 ABHD14A-ACY1A0A1B0GW23 586 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 C17orf102A2RUQ5 167 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 NOP56O00567 594 aaKnown RBP10.86□□□□□ -0.67
HMG20B-210ENST00000483417 ARHGEF15O94989 841 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 BRD1O95696 1058 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 PDCP20941 246 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 MCM7P33993 719 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 MTMR1Q13613 665 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 IL17AQ16552 155 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 CNKSR3Q6P9H4 555 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 USP38Q8NB14 1042 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 SEPT1Q8WYJ6 367 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 ATP6V0A1Q93050 837 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 MTMR9Q96QG7 549 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 PCYT2Q99447 389 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 EHMT1Q9H9B1 1298 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 DDX25Q9UHL0 483 aaKnown RBP10.86□□□□□ -0.67
HMG20B-210ENST00000483417 CLIC4Q9Y696 253 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 DOCK5Q9H7D0 1870 aa10.86□□□□□ -0.67
HMG20B-210ENST00000483417 RSPH10B2B2RC85 870 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
HMG20B-210ENST00000483417 LGR5O75473 907 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 CCNE2O96020 404 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 CA3P07451 260 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 RSPH10BP0C881 870 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 ZSCAN22P10073 491 aaPredicted RBP10.85□□□□□ -0.67
HMG20B-210ENST00000483417 POU3F3P20264 500 aaPredicted RBP10.85□□□□□ -0.67
HMG20B-210ENST00000483417 TCF7P36402 384 aaPredicted RBP10.85□□□□□ -0.67
HMG20B-210ENST00000483417 ANP32AP39687 249 aaKnown RBP10.85□□□□□ -0.67
HMG20B-210ENST00000483417 THPOP40225 353 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 WDR5P61964 334 aaKnown RBP10.85□□□□□ -0.67
HMG20B-210ENST00000483417 DEFB103AP81534 67 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 SP4Q02446 784 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 TAP1Q03518 808 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 GNL2Q13823 731 aaKnown RBP10.85□□□□□ -0.67
HMG20B-210ENST00000483417 PLEKHG4Q58EX7 1191 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 TTC38Q5R3I4 469 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 UTP14CQ5TAP6 766 aaKnown RBP10.85□□□□□ -0.67
HMG20B-210ENST00000483417 PPP4R3AQ6IN85 833 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 NIPA1Q7RTP0 329 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 RPAINQ86UA6 219 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 POTEDQ86YR6 584 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 DBF4BQ8NFT6 615 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 ETNPPLQ8TBG4 499 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 SLC5A5Q92911 643 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 ZNF577Q9BSK1 485 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
HMG20B-210ENST00000483417 NRCAMQ92823 1304 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 PTPRSQ13332 1948 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 A0A087WWV3 80 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 IPO5O00410 1097 aaKnown RBP10.84□□□□□ -0.67
HMG20B-210ENST00000483417 EML1O00423 815 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 CAND2O75155 1236 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 PSMD10O75832 226 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 ATG7O95352 703 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 F13A1P00488 732 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 GNAT1P11488 350 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 CEBPZQ03701 1054 aaKnown RBP10.84□□□□□ -0.67
HMG20B-210ENST00000483417 PTGDRQ13258 359 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 IKBKEQ14164 716 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 MARCH8Q5T0T0 291 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 PPP2R2DQ66LE6 453 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
HMG20B-210ENST00000483417 TMCO2Q7Z6W1 182 aaPredicted RBP10.84□□□□□ -0.67
HMG20B-210ENST00000483417 LMBR1Q8WVP7 490 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
HMG20B-210ENST00000483417 COL25A1Q9BXS0 654 aaPredicted RBP10.84□□□□□ -0.67
HMG20B-210ENST00000483417 KCNMB3Q9NPA1 279 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
HMG20B-210ENST00000483417 ERAP1Q9NZ08 941 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 ZNF215Q9UL58 517 aaPredicted RBP10.84□□□□□ -0.67
HMG20B-210ENST00000483417 NFASCO94856 1347 aa10.84□□□□□ -0.67
HMG20B-210ENST00000483417 IGKV6D-21A0A0A0MT36 114 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 LCHNA4D1U4 455 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 MBLAC1A4D2B0 266 aaPredicted RBP10.83□□□□□ -0.68
HMG20B-210ENST00000483417 RFXAPO00287 272 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 GJB5O95377 273 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 CHRNA1P02708 482 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 TXKP42681 527 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 GRIN1Q05586 938 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 B3GNT9Q6UX72 402 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 USP28Q96RU2 1077 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 GAS2L1Q99501 681 aaPredicted RBP10.83□□□□□ -0.68
HMG20B-210ENST00000483417 UNC45AQ9H3U1 944 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 SMARCAD1Q9H4L7 1026 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 PRUNE2Q8WUY3 3088 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 CHD7Q9P2D1 2997 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 EMSYQ7Z589 1322 aa10.83□□□□□ -0.68
HMG20B-210ENST00000483417 A0A0C4DFX4 3053 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 EPOPA6NHQ4 379 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 TLL1O43897 1013 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 EFCAB14O75071 495 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 ATP4AP20648 1035 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 TECP42680 631 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 KCNJ6P48051 423 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 TRAPPC10P48553 1259 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 ACTR2P61160 394 aa10.82□□□□□ -0.68
HMG20B-210ENST00000483417 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms