RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 UIMC1Q96RL1 719 aa13.11□□□□□ -0.31
EPHB3-203ENST00000482987 NSUN3Q9H649 340 aaKnown RBP13.11□□□□□ -0.31
EPHB3-203ENST00000482987 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
EPHB3-203ENST00000482987 TRPV2Q9Y5S1 764 aa13.11□□□□□ -0.31
EPHB3-203ENST00000482987 IGSF9BQ9UPX0 1349 aa13.11□□□□□ -0.31
EPHB3-203ENST00000482987 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 APOBRQ0VD83 1088 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 KRT32Q14532 448 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 PKN1Q16512 942 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 IER5Q5VY09 327 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 PTCRAQ6ISU1 281 aaPredicted RBP13.1□□□□□ -0.31
EPHB3-203ENST00000482987 MTHFD1LQ6UB35 978 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 ABHD15Q6UXT9 468 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
EPHB3-203ENST00000482987 PABPC5Q96DU9 382 aaKnown RBP13.1□□□□□ -0.31
EPHB3-203ENST00000482987 LRFN3Q9BTN0 628 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 CELF4Q9BZC1 486 aaKnown RBP13.1□□□□□ -0.31
EPHB3-203ENST00000482987 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 PADI3Q9ULW8 664 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 SQORQ9Y6N5 450 aa13.1□□□□□ -0.31
EPHB3-203ENST00000482987 SMIM35A0A1B0GVV1 85 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 ZBTB42B2RXF5 422 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
EPHB3-203ENST00000482987 RB1P06400 928 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 CYP3A4P08684 503 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 HMGB1P09429 215 aaKnown RBP13.09□□□□□ -0.31
EPHB3-203ENST00000482987 SCG2P13521 617 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 ATP4AP20648 1035 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 LTBRP36941 435 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 METAP2P50579 478 aaKnown RBP eCLIP13.09□□□□□ -0.31
EPHB3-203ENST00000482987 CAMK1Q14012 370 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 BTG3Q14201 252 aaPredicted RBP13.09□□□□□ -0.31
EPHB3-203ENST00000482987 TMEM266Q2M3C6 531 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 Q6ZUG5 572 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 PLA2G4DQ86XP0 818 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 ATP8B4Q8TF62 1192 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 BRF1Q92994 677 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 C11orf84Q9BUA3 381 aaPredicted RBP13.09□□□□□ -0.31
EPHB3-203ENST00000482987 ZMYND12Q9H0C1 365 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 NAP1L2Q9ULW6 460 aaPredicted RBP13.09□□□□□ -0.31
EPHB3-203ENST00000482987 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 MRPL42Q9Y6G3 142 aaKnown RBP13.09□□□□□ -0.31
EPHB3-203ENST00000482987 KDM3AQ9Y4C1 1321 aa13.09□□□□□ -0.31
EPHB3-203ENST00000482987 NID2Q14112 1375 aa13.08□□□□□ -0.31
EPHB3-203ENST00000482987 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 FAM86C2PA6NEL3 165 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 PI4K2BG5E9Z4 385 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
EPHB3-203ENST00000482987 MGEA5O60502 916 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 KLRC1P26715 233 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 HOXD11P31277 338 aaPredicted RBP13.08□□□□□ -0.32
EPHB3-203ENST00000482987 HSPA4P34932 840 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 GTF2F1P35269 517 aaKnown RBP eCLIP13.08□□□□□ -0.32
EPHB3-203ENST00000482987 ZNF76P36508 570 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 PLA2G5P39877 138 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 GATMP50440 423 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 SLC26A2P50443 739 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 KRT76Q01546 638 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 DLX2Q07687 328 aaPredicted RBP13.08□□□□□ -0.32
EPHB3-203ENST00000482987 HYAL1Q12794 435 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 PAK2Q13177 524 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 CTC1Q2NKJ3 1217 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 NPAS4Q8IUM7 802 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 KIAA0319LQ8IZA0 1049 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 GJD3Q8N144 294 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 TMEM40Q8WWA1 233 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 JAKMIP1Q96N16 626 aaKnown RBP13.08□□□□□ -0.32
EPHB3-203ENST00000482987 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 AGXT2Q9BYV1 514 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 GLT8D2Q9H1C3 349 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 RWDD3Q9Y3V2 267 aa13.08□□□□□ -0.32
EPHB3-203ENST00000482987 M0QZ92 97 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 BACH1O14867 736 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 EDIL3O43854 480 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 HBP1O60381 514 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 CSPG5O95196 566 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 MMP1P03956 469 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 DNAJB1P25685 340 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 NTRK3Q16288 839 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
EPHB3-203ENST00000482987 TMEM31Q5JXX7 168 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 SWSAP1Q6NVH7 229 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 EP400NLQ6ZTU2 488 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 CMTR2Q8IYT2 770 aaKnown RBP13.07□□□□□ -0.32
EPHB3-203ENST00000482987 NME8Q8N427 588 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 FBXL16Q8N461 479 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
EPHB3-203ENST00000482987 PHKBQ93100 1093 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 LENG9Q96B70 501 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 PLVAPQ9BX97 442 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 LMAN2LQ9H0V9 348 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 ERVK-5Q9HDB9 667 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 ALG13Q9NP73 1137 aaKnown RBP13.07□□□□□ -0.32
EPHB3-203ENST00000482987 ZNF302Q9NR11 478 aa13.07□□□□□ -0.32
EPHB3-203ENST00000482987 CLDND1Q9NY35 253 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms