RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 SPATC1Q76KD6 591 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 CEP68Q76N32 757 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 DCP2Q8IU60 420 aaKnown RBP3.38□□□□□ -1.87
USH2A-204ENST00000481786 OSBP2Q969R2 916 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 ARMC5Q96C12 935 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 AARSD1Q9BTE6 412 aaKnown RBP3.38□□□□□ -1.87
USH2A-204ENST00000481786 CCDC113Q9H0I3 377 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 MEGF9Q9H1U4 602 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 JADE2Q9NQC1 790 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 ZFR2Q9UPR6 939 aaKnown RBP3.38□□□□□ -1.87
USH2A-204ENST00000481786 PCDHA2Q9Y5H9 948 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 RGS12O14924 1447 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 FGD6Q6ZV73 1430 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 MROH2AA6NES4 1674 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 MLH3Q9UHC1 1453 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 TRAV20A0A0B4J274 112 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 H7BY64 318 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 U2SURPO15042 1029 aaKnown RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 PRODHO43272 600 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 ADCY3O60266 1144 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 B4GALT4O60513 344 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 MSCO60682 206 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 PABPC1P11940 636 aaKnown RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 ZNF28P17035 718 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 GTF2F1P35269 517 aaKnown RBP eCLIP3.37□□□□□ -1.87
USH2A-204ENST00000481786 RBM6P78332 1123 aaKnown RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 ABHD18Q0P651 414 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 SURF1Q15526 300 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 NTRK3Q16288 839 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 NRN1LQ496H8 165 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 MROH9Q5TGP6 573 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 EFCAB2Q5VUJ9 269 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 YOD1Q5VVQ6 348 aaPredicted RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 NSMFQ6X4W1 530 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 RNF207Q6ZRF8 634 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 LRRC47Q8N1G4 583 aaKnown RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 THEMISQ8N1K5 641 aaPredicted RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 AFAP1Q8N556 730 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 SEC14L1Q92503 715 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 EXTL1Q92935 676 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 TRMT2BQ96GJ1 504 aaKnown RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 TMEM169Q96HH4 297 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 GNRHR2Q96P88 292 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 HIRIP3Q9BW71 556 aaPredicted RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 SPATA9Q9BWV2 254 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 AP5M1Q9H0R1 490 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 CDIP1Q9H305 208 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 GPR27Q9NS67 375 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 SIRPGQ9P1W8 387 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 PPP1R1BQ9UD71 204 aaPredicted RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 KDM5DQ9BY66 1539 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 KDM5CP41229 1560 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 DIP2CQ9Y2E4 1556 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 LRP6O75581 1613 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 DNMT1P26358 1616 aaKnown RBP3.37□□□□□ -1.87
USH2A-204ENST00000481786 RAPGEF6Q8TEU7 1601 aa3.37□□□□□ -1.87
USH2A-204ENST00000481786 A0A087X1B8 175 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 BLACEA4D250 179 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 CYP1A1P04798 512 aaPredicted RBP3.36□□□□□ -1.87
USH2A-204ENST00000481786 STAT5AP42229 794 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 C1QTNF8P60827 252 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 ADAM9Q13443 819 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 PRAMEF18Q5VWM3 479 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 RSPO2Q6UXX9 243 aaPredicted RBP3.36□□□□□ -1.87
USH2A-204ENST00000481786 ARHGEF18Q6ZSZ5 1173 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 USP53Q70EK8 1073 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 MIB1Q86YT6 1006 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 KBTBD2Q8IY47 623 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 DCAF4Q8WV16 495 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 NEU4Q8WWR8 484 aaPredicted RBP3.36□□□□□ -1.87
USH2A-204ENST00000481786 ZSWIM3Q96MP5 696 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 PHF20Q9BVI0 1012 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 CSRNP2Q9H175 543 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 CLDND1Q9NY35 253 aa3.36□□□□□ -1.87
USH2A-204ENST00000481786 LRRC9Q6ZRR7 1453 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 DEPDC5O75140 1603 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 NHSL1Q5SYE7 1610 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 FAM221BA6H8Z2 402 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 CCDC85CA6NKD9 419 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 HGSO14964 777 aaPredicted RBP3.35□□□□□ -1.87
USH2A-204ENST00000481786 FOXS1O43638 330 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 DIAPH1O60610 1272 aaKnown RBP3.35□□□□□ -1.87
USH2A-204ENST00000481786 TADA3O75528 432 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 MLLT6P55198 1093 aaPredicted RBP3.35□□□□□ -1.87
USH2A-204ENST00000481786 IFRD2Q12894 506 aaPredicted RBP3.35□□□□□ -1.87
USH2A-204ENST00000481786 RASA3Q14644 834 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 MTERF2Q49AM1 385 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 USP39Q53GS9 565 aaKnown RBP3.35□□□□□ -1.87
USH2A-204ENST00000481786 EMC4Q5J8M3 183 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 FOXB2Q5VYV0 432 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 STYK1Q6J9G0 422 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
USH2A-204ENST00000481786 PKN3Q6P5Z2 889 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 KCNT2Q6UVM3 1135 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 LBX2Q6XYB7 198 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 ETV3LQ6ZN32 361 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 MILR1Q7Z6M3 343 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 PLEKHH3Q7Z736 793 aa3.35□□□□□ -1.87
USH2A-204ENST00000481786 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.35□□□□□ -1.87
USH2A-204ENST00000481786 VOPP1Q96AW1 172 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms