RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SYDE2Q5VT97 1194 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 PROM2Q8N271 834 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 CALN1Q9BXU9 219 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SNX2O60749 519 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SOX5P35711 763 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 TMEM63CQ9P1W3 806 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 LRRN2O75325 713 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SLFN14P0C7P3 912 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 GNAT1P11488 350 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 KIAA1755Q5JYT7 1200 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 NOP9Q86U38 636 aaKnown RBP10.23□□□□□ -0.77
VEGFA-212ENST00000480614 NEO1Q92859 1461 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 QRICH2Q9H0J4 1663 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 PDE8BO95263 885 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SLC4A1P02730 911 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 ORC2Q13416 577 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-212ENST00000480614 RNF217Q8TC41 542 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 KLHL29Q96CT2 875 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 TMEM60Q9H2L4 133 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 OCA2Q04671 838 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 KYAT1Q16773 422 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 THEM5Q8N1Q8 247 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 ELMOD1Q8N336 334 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 TTC8Q8TAM2 541 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 APOL6Q9BWW8 343 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 PLEKHA4Q9H4M7 779 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 POLR1AO95602 1720 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-212ENST00000480614 BCAMP50895 628 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 MTRQ99707 1265 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 ATP6V0A4Q9HBG4 840 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 STX18Q9P2W9 335 aaKnown RBP10.23□□□□□ -0.77
VEGFA-212ENST00000480614 THRAP3Q9Y2W1 955 aaKnown RBP10.23□□□□□ -0.77
VEGFA-212ENST00000480614 EFCAB6Q5THR3 1501 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SERPINB2P05120 415 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SERPINB10P48595 397 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 GPR162Q16538 588 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 GOLGA8SH3BPF8 625 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 MYO1DO94832 1006 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 IFNAR2P48551 515 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 HDAC4P56524 1084 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SLFNL1Q499Z3 407 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SUFUQ9UMX1 484 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 TET3O43151 1660 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 PODXLO00592 558 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 APBA3O96018 575 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 NR1D1P20393 614 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 SF3A3Q12874 501 aaKnown RBP eCLIP10.23□□□□□ -0.779e-12■■■■■ 32
VEGFA-212ENST00000480614 NAA35Q5VZE5 725 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 LRRC8BQ6P9F7 803 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 EFHBQ8N7U6 833 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 TRMT10CQ7L0Y3 403 aaKnown RBP10.22□□□□□ -0.77
VEGFA-212ENST00000480614 STX19Q8N4C7 294 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 CARD14Q9BXL6 1004 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 KIAA1586Q9HCI6 787 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 MRGBPQ9NV56 204 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 SERPINB13Q9UIV8 391 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 PNMA6FA0A0J9YX94 578 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 MIF4GDA9UHW6 222 aaKnown RBP10.22□□□□□ -0.77
VEGFA-212ENST00000480614 GFAPP14136 432 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 PLTPP55058 493 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 CATSPER1Q8NEC5 780 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 MSTO1Q9BUK6 570 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 FSD1LQ9BXM9 530 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 TRPA1O75762 1119 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 RWDD2BP57060 319 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-212ENST00000480614 FAM173BQ6P4H8 233 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 GDAP1Q8TB36 358 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 NCLNQ969V3 563 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 GFPT2O94808 682 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 A1BGP04217 495 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 PDIA3P30101 505 aaKnown RBP10.22□□□□□ -0.77
VEGFA-212ENST00000480614 CASP14P31944 242 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 MORF4L2Q15014 288 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 MORC4Q8TE76 937 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 RUBCNQ92622 972 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 HEXIM2Q96MH2 286 aaKnown RBP10.22□□□□□ -0.77
VEGFA-212ENST00000480614 L3MBTL1Q9Y468 752 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 GYG1P46976 350 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 SCNN1DP51172 638 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 GRIN1Q05586 938 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 SCRN1Q12765 414 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 CEP170P1Q96L14 293 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 EPAS1Q99814 870 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 TRIM55Q9BYV6 548 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 ATG3Q9NT62 314 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 ARID1BQ8NFD5 2236 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-212ENST00000480614 TCP10L2B9ZVM9 353 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 RAB42Q8N4Z0 105 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 KIF19Q2TAC6 998 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 KLHL38Q2WGJ6 581 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 MMTAG2Q9BU76 263 aaKnown RBP10.22□□□□□ -0.77
VEGFA-212ENST00000480614 ZMYM1Q5SVZ6 1142 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 YY1AP1Q9H869 796 aa10.22□□□□□ -0.77
VEGFA-212ENST00000480614 KPNA7A9QM74 516 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 KRT8P05787 483 aa10.21□□□□□ -0.77
VEGFA-212ENST00000480614 GRAMD1BQ3KR37 738 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms