RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 CCDC43Q96MW1 224 aaKnown RBP13.3□□□□□ -0.28
TM9SF4-206ENST00000479591 TIPINQ9BVW5 301 aa13.3□□□□□ -0.28
TM9SF4-206ENST00000479591 BCAS3Q9H6U6 928 aa13.3□□□□□ -0.28
TM9SF4-206ENST00000479591 ZNF302Q9NR11 478 aa13.3□□□□□ -0.28
TM9SF4-206ENST00000479591 PANK4Q9NVE7 773 aa13.3□□□□□ -0.28
TM9SF4-206ENST00000479591 GSTTP1A0A1W2PQM5 241 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 NOP56O00567 594 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 BACH1O14867 736 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 NKRFO15226 690 aaKnown RBP eCLIP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 GH1P01241 217 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 GAP43P17677 238 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 GUCY2CP25092 1073 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 PSMC4P43686 418 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 VEGFBP49765 207 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 RARRES1P49788 294 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 MYL5Q02045 173 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 SP4Q02446 784 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 SP3Q02447 781 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 EHHADHQ08426 723 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 ACVR2BQ13705 512 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 GIT2Q14161 759 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 KIF22Q14807 665 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 IQSEC1Q6DN90 963 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 C1orf186Q6ZWK4 172 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 DHX40Q8IX18 779 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 AOPEPQ8N6M6 819 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 ENOX1Q8TC92 643 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 AFAP1L1Q8TED9 768 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 EMID1Q96A84 441 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 PDGFCQ9NRA1 345 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 ODF2LQ9ULJ1 636 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 MAFBQ9Y5Q3 323 aaPredicted RBP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 MYH9P35579 1960 aaKnown RBP13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 DOCK3Q8IZD9 2030 aa13.29□□□□□ -0.28
TM9SF4-206ENST00000479591 ZBTB39O15060 712 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 TBCAO75347 108 aaKnown RBP13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 CYP2B6P20813 491 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 TCF7P36402 384 aaPredicted RBP13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 COASYQ13057 564 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 XKR3Q5GH77 459 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 PADI6Q6TGC4 694 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 ADSSL1Q8N142 457 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 DHTKD1Q96HY7 919 aaPredicted RBP13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 SPATA33Q96N06 139 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 GPR20Q99678 358 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 REEP2Q9BRK0 252 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 RUSC1Q9BVN2 902 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 AZI2Q9H6S1 392 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 RNF186Q9NXI6 227 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 GDAQ9Y2T3 454 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 COL4A3BPQ9Y5P4 624 aa13.28□□□□□ -0.28
TM9SF4-206ENST00000479591 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
TM9SF4-206ENST00000479591 NPHP3-ACAD11A0A0J9YXS1 232 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 PSMA7O14818 248 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 ZNF862O60290 1169 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 SORBS3O60504 671 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 LGR5O75473 907 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 STBD1O95210 358 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 KIF20AO95235 890 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 OATP04181 439 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 CTGFP29279 349 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 ADCYAP1R1P41586 468 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 PRCPP42785 496 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 SLC26A2P50443 739 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 STAT5BP51692 787 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 PRKCEQ02156 737 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 ARHGAP1Q07960 439 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 STK4Q13043 487 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 PAK1Q13153 545 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 NCAPHQ15003 741 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 HSDL1Q3SXM5 330 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 DUSP28Q4G0W2 176 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 XKR9Q5GH70 373 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 HERC4Q5GLZ8 1057 aaPredicted RBP13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 FAM26FQ5R3K3 315 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 ANO5Q75V66 913 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 PLPPR4Q7Z2D5 763 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 TRMT44Q8IYL2 757 aaKnown RBP13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 SMYD4Q8IYR2 804 aaPredicted RBP13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 FAM167AQ96KS9 214 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 TRIM47Q96LD4 638 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 SEL1LQ9UBV2 794 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 NRBP1Q9UHY1 535 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 RWDD2AQ9UIY3 292 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 ZHX1Q9UKY1 873 aaPredicted RBP13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 TELO2Q9Y4R8 837 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 PPME1Q9Y570 386 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 EMSYQ7Z589 1322 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 SYNRGQ9UMZ2 1314 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 CASP8AP2Q9UKL3 1982 aa13.27□□□□□ -0.29
TM9SF4-206ENST00000479591 TRPA1O75762 1119 aa13.26□□□□□ -0.29
TM9SF4-206ENST00000479591 ECM2O94769 699 aaPredicted RBP13.26□□□□□ -0.29
TM9SF4-206ENST00000479591 FAM13AO94988 1023 aa13.26□□□□□ -0.29
TM9SF4-206ENST00000479591 IGHA2P01877 340 aa13.26□□□□□ -0.29
TM9SF4-206ENST00000479591 DEKP35659 375 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms