RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FAM13AO94988 1023 aa8.78□□□□□ -1
VMA21-203ENST00000477649 SLC25A27O95847 323 aa8.78□□□□□ -1
VMA21-203ENST00000477649 ARP10275 920 aa8.78□□□□□ -1
VMA21-203ENST00000477649 EPHX2P34913 555 aa8.78□□□□□ -1
VMA21-203ENST00000477649 QARSP47897 775 aaKnown RBP8.78□□□□□ -1
VMA21-203ENST00000477649 ZNF131P52739 623 aa8.78□□□□□ -1
VMA21-203ENST00000477649 PMS1P54277 932 aaKnown RBP8.78□□□□□ -1
VMA21-203ENST00000477649 TBC1D8BQ0IIM8 1120 aa8.78□□□□□ -1
VMA21-203ENST00000477649 PPIL2Q13356 520 aa8.78□□□□□ -1
VMA21-203ENST00000477649 VWA3BQ502W6 1294 aa8.78□□□□□ -1
VMA21-203ENST00000477649 ARSHQ5FYA8 562 aa8.78□□□□□ -1
VMA21-203ENST00000477649 MUM1L1Q5H9M0 696 aa8.78□□□□□ -1
VMA21-203ENST00000477649 RINT1Q6NUQ1 792 aa8.78□□□□□ -1
VMA21-203ENST00000477649 CYP26C1Q6V0L0 522 aa8.78□□□□□ -1
VMA21-203ENST00000477649 NSMFQ6X4W1 530 aa8.78□□□□□ -1
VMA21-203ENST00000477649 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
VMA21-203ENST00000477649 C1orf186Q6ZWK4 172 aa8.78□□□□□ -1
VMA21-203ENST00000477649 RIOX2Q8IUF8 465 aa8.78□□□□□ -1
VMA21-203ENST00000477649 TPH2Q8IWU9 490 aa8.78□□□□□ -1
VMA21-203ENST00000477649 C4orf19Q8IY42 314 aa8.78□□□□□ -1
VMA21-203ENST00000477649 OR8K1Q8NGG5 319 aa8.78□□□□□ -1
VMA21-203ENST00000477649 ZNF507Q8TCN5 953 aa8.78□□□□□ -1
VMA21-203ENST00000477649 TMEM174Q8WUU8 243 aa8.78□□□□□ -1
VMA21-203ENST00000477649 DYDC2Q96IM9 177 aa8.78□□□□□ -1
VMA21-203ENST00000477649 INPP4AQ96PE3 977 aaPredicted RBP8.78□□□□□ -1
VMA21-203ENST00000477649 TAAR1Q96RJ0 339 aa8.78□□□□□ -1
VMA21-203ENST00000477649 NOC4LQ9BVI4 516 aaKnown RBP8.78□□□□□ -1
VMA21-203ENST00000477649 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
VMA21-203ENST00000477649 VPS16Q9H269 839 aa8.78□□□□□ -1
VMA21-203ENST00000477649 BHMT2Q9H2M3 363 aa8.78□□□□□ -1
VMA21-203ENST00000477649 UNC45AQ9H3U1 944 aa8.78□□□□□ -1
VMA21-203ENST00000477649 PARVGQ9HBI0 331 aa8.78□□□□□ -1
VMA21-203ENST00000477649 ANKEF1Q9NU02 776 aa8.78□□□□□ -1
VMA21-203ENST00000477649 ZNHIT6Q9NWK9 470 aaKnown RBP8.78□□□□□ -1
VMA21-203ENST00000477649 TAB2Q9NYJ8 693 aa8.78□□□□□ -1
VMA21-203ENST00000477649 CAPN11Q9UMQ6 739 aa8.78□□□□□ -1
VMA21-203ENST00000477649 KCNH4Q9UQ05 1017 aa8.78□□□□□ -1
VMA21-203ENST00000477649 LUC7L2Q9Y383 392 aaKnown RBP8.78□□□□□ -1
VMA21-203ENST00000477649 DAAM1Q9Y4D1 1078 aa8.78□□□□□ -1
VMA21-203ENST00000477649 A0A0G2JLL6 359 aaPredicted RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 GLTPD2A6NH11 291 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 SPDYE16A6NNV3 312 aaPredicted RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 SLC16A3O15427 465 aaKnown RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 DHX15O43143 795 aaKnown RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 TEX33O43247 280 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 NR3C2P08235 984 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 CCDC175P0C221 793 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 TNNT1P13805 278 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 OSBPP22059 807 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 ICAM3P32942 547 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 PSMC5P62195 406 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 FKBP1BP68106 108 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 MRPS9P82933 396 aaKnown RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 CDK17Q00537 523 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 RBL2Q08999 1139 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 BAATQ14032 418 aaPredicted RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 HSP90AA2PQ14568 343 aaPredicted RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 TMEM132BQ14DG7 1078 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 KNOP1Q1ED39 458 aaKnown RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 HSP90AA4PQ58FG1 418 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 E4F1Q66K89 784 aaPredicted RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 LRRC55Q6ZSA7 311 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 EPM2AIP1Q7L775 607 aaPredicted RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 OTUD6AQ7L8S5 288 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 FRMD5Q7Z6J6 570 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 PRRT2Q7Z6L0 340 aaPredicted RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 TXLNBQ8N3L3 684 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 KIF18AQ8NI77 898 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 SCFD1Q8WVM8 642 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 ATP6V0A1Q93050 837 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 REEP2Q9BRK0 252 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 LXNQ9BS40 222 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 MKNK1Q9BUB5 465 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 C17orf75Q9HAS0 396 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 TYW1Q9NV66 732 aaKnown RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 CYP39A1Q9NYL5 469 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 COL20A1Q9P218 1284 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 LARSQ9P2J5 1176 aaKnown RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 SCAF8Q9UPN6 1271 aaKnown RBP8.77□□□□□ -1.01
VMA21-203ENST00000477649 SBF1O95248 1867 aa8.77□□□□□ -1.01
VMA21-203ENST00000477649 PHIPQ8WWQ0 1821 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 TRAF5O00463 557 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 EIF3JO75822 258 aaKnown RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 RGS20O76081 388 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 GYPCP04921 128 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 YBX3P16989 372 aaKnown RBP eCLIP8.76□□□□□ -1.012e-7■□□□□ 10.5
VMA21-203ENST00000477649 TRIM21P19474 475 aaKnown RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 EIF2AK2P19525 551 aaKnown RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 KRT9P35527 623 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 IRX3P78415 501 aaPredicted RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 ZBED6P86452 979 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 CYP4A11Q02928 519 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 CTTNQ14247 550 aaKnown RBP8.76□□□□□ -1.01
VMA21-203ENST00000477649 STXBP2Q15833 593 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 CCDC40Q4G0X9 1142 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 PRAMEF18Q5VWM3 479 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 CEP135Q66GS9 1140 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 KCNV1Q6PIU1 500 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 SLC30A10Q6XR72 485 aa8.76□□□□□ -1.01
VMA21-203ENST00000477649 HS2ST1Q7LGA3 356 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms