RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 SNX27Q96L92 541 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 DLGAP2Q9P1A6 1054 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 CTTNBP2NLQ9P2B4 639 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 KIAA1551Q9HCM1 1747 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 HTR3EA5X5Y0 456 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 TMEM110-MUSTN1A8MSY1 372 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 PPEF1O14829 653 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 RFC5P40937 340 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 NT5C2P49902 561 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 LSAMPQ13449 338 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 CFAP61Q8NHU2 1237 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 NACC2Q96BF6 587 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 ZMAT2Q96NC0 199 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 SLF1Q9BQI6 1058 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 EIF2AQ9BY44 585 aaKnown RBP13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 TAOK3Q9H2K8 898 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 CD209Q9NNX6 404 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 PDP2Q9P2J9 529 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 EFR3BQ9Y2G0 817 aa13.76□□□□□ -0.21
RTFDC1-207ENST00000477573 LSM1O15116 133 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 TBC1D12O60347 775 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 IL1R1P14778 569 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 NPR1P16066 1061 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 GNAZP19086 355 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 ME1P48163 572 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 NSUN2Q08J23 767 aaKnown RBP eCLIP13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 FOXD4Q12950 439 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 QPCTQ16769 361 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 TSEN2Q8NCE0 465 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 IQCDQ96DY2 449 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 CLMNQ96JQ2 1002 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 SH3GL1Q99961 368 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 EXOC1Q9NV70 894 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 SUCLA2Q9P2R7 463 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 SLC12A6Q9UHW9 1150 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 TUBE1Q9UJT0 475 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 SPO11Q9Y5K1 396 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 N6AMT1Q9Y5N5 214 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 NID2Q14112 1375 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 TRIM43BA6NCK2 446 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 C6orf229H3BNL8 230 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 ATP2C2O75185 946 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 UPP2O95045 317 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 PDGFRBP09619 1106 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 IARSP41252 1262 aaKnown RBP13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 FOSBP53539 338 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 FAAH2Q6GMR7 532 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 TMEM53Q6P2H8 277 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 ANKRD13BQ86YJ7 626 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 RAB11FIP4Q86YS3 637 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 WASF1Q92558 559 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 HIC2Q96JB3 615 aa13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 DCP1AQ9NPI6 582 aaPredicted RBP13.75□□□□□ -0.21
RTFDC1-207ENST00000477573 BAZ2AQ9UIF9 1905 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 RGPD3A6NKT7 1758 aaPredicted RBP13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 RGPD4Q7Z3J3 1758 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 ZNF233A6NK53 670 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 USP17L12C9JPN9 530 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 USP17L21D6R901 530 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 ZMYND10O75800 440 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 KRT14P02533 472 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 FGRP09769 529 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 CASP14P31944 242 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 CCT8P50990 548 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 ALDH5A1P51649 535 aaPredicted RBP13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 MRPS25P82663 173 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 MAP7Q14244 749 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 SMUG1Q53HV7 270 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 KLC3Q6P597 504 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 ZNF572Q7Z3I7 529 aaPredicted RBP13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 TRIML1Q8N9V2 468 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 DEPTORQ8TB45 409 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 SREK1Q8WXA9 508 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 DDX12PQ92771 950 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 CATSPER2Q96P56 530 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 JAG2Q9Y219 1238 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 TACC3Q9Y6A5 838 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 NRXN2Q9P2S2 1712 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 STK36Q9NRP7 1315 aa13.74□□□□□ -0.21
RTFDC1-207ENST00000477573 SUPT3HO75486 399 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 GUCY1B3Q02153 619 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 PDE4BQ07343 736 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 TRIM29Q14134 588 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 CPLX4Q7Z7G2 160 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 TMTC1Q8IUR5 882 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 ANKK1Q8NFD2 765 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 NKX2-3Q8TAU0 364 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 ATP8B4Q8TF62 1192 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 TAF4BQ92750 862 aa13.73□□□□□ -0.21
RTFDC1-207ENST00000477573 DHTKD1Q96HY7 919 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms