RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-229	ENST00000475651	TBX22	Q9Y458	520 aa		5	□□□□□ -1.61
RBM39-229	ENST00000475651	ATP6V1D	Q9Y5K8	247 aa		5	□□□□□ -1.61
RBM39-229	ENST00000475651	HCFC2	Q9Y5Z7	792 aa		5	□□□□□ -1.61
RBM39-229	ENST00000475651	SBNO1	A3KN83	1393 aa		5	□□□□□ -1.61
RBM39-229	ENST00000475651	PLEKHG1	Q9ULL1	1385 aa		5	□□□□□ -1.61
RBM39-229	ENST00000475651	TECPR2	O15040	1411 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	ZBTB7C	A1YPR0	619 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651		C9IYK1	514 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	C1QTNF3-AMACR	E9PGA6	284 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	EPB41L2	O43491	1005 aa	Known RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	AKAP8	O43823	692 aa	Known RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	PPM1B	O75688	479 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	DDX58	O95786	925 aa	Known RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	PTMA	P06454	111 aa	Known RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	PDIA4	P13667	645 aa	Known RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	PAM	P19021	973 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	TNFRSF1A	P19438	455 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	MX1	P20591	662 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	HMGA2	P52926	109 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	PDE1A	P54750	535 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	ANAPC15	P60006	121 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	ATP8B2	P98198	1209 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	TEF	Q10587	303 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	PPP2R5D	Q14738	602 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	MTHFSD	Q2M296	383 aa	Known RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	C1orf141	Q5JVX7	400 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	HEATR6	Q6AI08	1181 aa	Known RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	WWC2	Q6AWC2	1192 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	ZNF761	Q86XN6	746 aa	Predicted RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	ERC1	Q8IUD2	1116 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	TTLL6	Q8N841	843 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	DVL3	Q92997	716 aa	Predicted RBP	4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	C8orf49	Q96NF6	230 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	MEIS3	Q99687	375 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	YIPF4	Q9BSR8	244 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	MIS18A	Q9NYP9	233 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	RWDD3	Q9Y3V2	267 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	RICTOR	Q6R327	1708 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	RTL1	A6NKG5	1358 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	SPATA31D1	Q6ZQQ2	1576 aa		4.99	□□□□□ -1.61
RBM39-229	ENST00000475651	AOX1	Q06278	1338 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	MAP3K19	Q56UN5	1328 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	SIGLEC1	Q9BZZ2	1709 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	KIF20B	Q96Q89	1820 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	HIP1	O00291	1037 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	SURF6	O75683	361 aa	Known RBP	4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	LETM1	O95202	739 aa	Predicted RBP	4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	GSPT1	P15170	499 aa	Known RBP	4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	IFNGR1	P15260	489 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	GUCY2C	P25092	1073 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	KCNJ4	P48050	445 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	AMPD2	Q01433	879 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	FAM26F	Q5R3K3	315 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	CAVIN1	Q6NZI2	390 aa	Known RBP	4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	ETV3L	Q6ZN32	361 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	CLEC17A	Q6ZS10	378 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	KCNH5	Q8NCM2	988 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	KIF1BP	Q96EK5	621 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	FAM86C1	Q9NVL1	165 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.98	□□□□□ -1.61	3e-6	■■■■□ 19.7
RBM39-229	ENST00000475651	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	BACE2	Q9Y5Z0	518 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	DUSP10	Q9Y6W6	482 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	MSH6	P52701	1360 aa		4.98	□□□□□ -1.61
RBM39-229	ENST00000475651	WDR33	Q9C0J8	1336 aa	Known RBP	4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	USP6	P35125	1406 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	NCOA3	Q9Y6Q9	1424 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	ANKRD26	Q9UPS8	1709 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	MAP3K5	Q99683	1374 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	MROH6	A6NGR9	719 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	SHOX	O15266	292 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	CYP7B1	O75881	506 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	HOXB7	P09629	217 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	IFIT2	P09913	472 aa	Known RBP	4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	ZNF20	P17024	532 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	ZKSCAN1	P17029	563 aa	Predicted RBP	4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	EIF2S2	P20042	333 aa	Known RBP	4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	RPL13	P26373	211 aa	Known RBP	4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	DDIT3	P35638	169 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	SMAD4	Q13485	552 aa	Known RBP	4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	GNPTAB	Q3T906	1256 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	AMOT	Q4VCS5	1084 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	CLASRP	Q8N2M8	674 aa	Known RBP	4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	SLC16A11	Q8NCK7	471 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	C1QTNF3	Q9BXJ4	246 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	DIAPH3	Q9NSV4	1193 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	EXOC6B	Q9Y2D4	811 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	SUGT1	Q9Y2Z0	365 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	ZNF451	Q9Y4E5	1061 aa		4.97	□□□□□ -1.61
RBM39-229	ENST00000475651	IBTK	Q9P2D0	1353 aa	Predicted RBP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	VIRMA	Q69YN4	1812 aa	Known RBP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	STXBP3	O00186	592 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	MATN3	O15232	486 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms