RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RSPH10B2B2RC85 870 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 FGBP02675 491 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 OATP04181 439 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 P4HBP07237 508 aaKnown RBP15.45■□□□□ 0.06
USF1-205ENST00000473969 OR52Z1P0C646 297 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 RSPH10BP0C881 870 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 QARSP47897 775 aaKnown RBP15.45■□□□□ 0.06
USF1-205ENST00000473969 RBL2Q08999 1139 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 HIC1Q14526 733 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 HABP4Q5JVS0 413 aaKnown RBP15.45■□□□□ 0.06
USF1-205ENST00000473969 DHX38Q92620 1227 aaKnown RBP15.45■□□□□ 0.06
USF1-205ENST00000473969 CTAGE1Q96RT6 745 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 WNT8AQ9H1J5 351 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 PRO3102Q9H379 93 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 VAV3Q9UKW4 847 aa15.45■□□□□ 0.06
USF1-205ENST00000473969 IGSF9BQ9UPX0 1349 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 DDX11L8A8MPP1 907 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 M0QZ92 97 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 MAGEB2O15479 319 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 ACRP10323 421 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 ACTN1P12814 892 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 KLRC1P26715 233 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 ADAM17P78536 824 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 PRKCEQ02156 737 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 SHHQ15465 462 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 XKR3Q5GH77 459 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 ZNF618Q5T7W0 954 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 MTHFD1LQ6UB35 978 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 B3GNT9Q6UX72 402 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 BRAPQ7Z569 592 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 BANK1Q8NDB2 785 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 ERMNQ8TAM6 284 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 RNPC3Q96LT9 517 aaKnown RBP15.44■□□□□ 0.06
USF1-205ENST00000473969 MTMR9Q96QG7 549 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 RAB34Q9BZG1 259 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 PCDHA2Q9Y5H9 948 aa15.44■□□□□ 0.06
USF1-205ENST00000473969 MBLAC1A4D2B0 266 aaPredicted RBP15.43■□□□□ 0.06
USF1-205ENST00000473969 EML1O00423 815 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 LAD1O00515 517 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 WNT7AO00755 349 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 CTSHP09668 335 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 PDIA4P13667 645 aaKnown RBP15.43■□□□□ 0.06
USF1-205ENST00000473969 ATP4AP20648 1035 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 SYT1P21579 422 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 TMOD1P28289 359 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 TRIM71Q2Q1W2 868 aaKnown RBP15.43■□□□□ 0.06
USF1-205ENST00000473969 MARCH8Q5T0T0 291 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 IER5Q5VY09 327 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 OTUD6AQ7L8S5 288 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 NEK9Q8TD19 979 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 TRAPPC12Q8WVT3 735 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 DNAJB3Q8WWF6 145 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.43■□□□□ 0.061e-13■■□□□ 11.9
USF1-205ENST00000473969 FAM49AQ9H0Q0 323 aaPredicted RBP15.43■□□□□ 0.06
USF1-205ENST00000473969 TMEM60Q9H2L4 133 aa15.43■□□□□ 0.06
USF1-205ENST00000473969 SEPT9Q9UHD8 586 aaPredicted RBP15.43■□□□□ 0.06
USF1-205ENST00000473969 DNAH12Q6ZR08 3092 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 SMIM35A0A1B0GVV1 85 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 ZNF862O60290 1169 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 TECP42680 631 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 EPHB4P54760 987 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 BECN1Q14457 450 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 NBR1Q14596 966 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 UGCGQ16739 394 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 TMEM240Q5SV17 173 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 C9orf50Q5SZB4 431 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 RUFY4Q6ZNE9 571 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 RPAINQ86UA6 219 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 TPH2Q8IWU9 490 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 NME8Q8N427 588 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 METTL13Q8N6R0 699 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 WNT8BQ93098 351 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 DYDC2Q96IM9 177 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 EIF2AK1Q9BQI3 630 aaKnown RBP15.42■□□□□ 0.06
USF1-205ENST00000473969 ZSWIM4Q9H7M6 989 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 PCDHB6Q9Y5E3 794 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 STK24Q9Y6E0 443 aa15.42■□□□□ 0.06
USF1-205ENST00000473969 ZBBXA8MT70 800 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 TOB1P50616 345 aaPredicted RBP15.41■□□□□ 0.06
USF1-205ENST00000473969 CYP4A11Q02928 519 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 TBC1D8BQ0IIM8 1120 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 PTGDRQ13258 359 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 MTERF2Q49AM1 385 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 OTOP2Q7RTS6 562 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 FERMT3Q86UX7 667 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 EXOC8Q8IYI6 725 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
USF1-205ENST00000473969 JPH2Q9BR39 696 aaPredicted RBP15.41■□□□□ 0.06
USF1-205ENST00000473969 LXNQ9BS40 222 aa15.41■□□□□ 0.06
USF1-205ENST00000473969 LTBP2Q14767 1821 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 KAT6AQ92794 2004 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 STX6O43752 255 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 BMP15O95972 392 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 DNM2P50570 870 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 MRPS6P82932 125 aaKnown RBP15.4■□□□□ 0.06
USF1-205ENST00000473969 SPIRE1Q08AE8 756 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 CTTNQ14247 550 aaKnown RBP15.4■□□□□ 0.06
USF1-205ENST00000473969 EFCAB12Q6NXP0 572 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms