RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SEMA6CQ9H3T2 930 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 CABP5Q9NP86 173 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 STK32BQ9NY57 414 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 DPP7Q9UHL4 492 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 TBC1D30Q9Y2I9 924 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 FHOD1Q9Y613 1164 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 A0A087WV62 115 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 AQP12BA6NM10 295 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 SHISA8B8ZZ34 492 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 RASA4BC9J798 803 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 ZNF561-AS1K7EIQ3 104 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 RASA4O43374 803 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 PPFIA3O75145 1194 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 OFD1O75665 1012 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 NFICP08651 508 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 MX2P20592 715 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 FLT3P36888 993 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 TMEM132BQ14DG7 1078 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 TIGD6Q17RP2 521 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 AGAP9Q5VTM2 703 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 HIBCHQ6NVY1 386 aaPredicted RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 CC2D1AQ6P1N0 951 aaPredicted RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 APOA5Q6Q788 366 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 SLCO4C1Q6ZQN7 724 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 MMS22LQ6ZRQ5 1243 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 TBC1D1Q86TI0 1168 aaPredicted RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 C12orf50Q8NA57 414 aaPredicted RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 ATG16L2Q8NAA4 619 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 OR1N1Q8NGS0 311 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 FBLIM1Q8WUP2 373 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 ERCC4Q92889 916 aaPredicted RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 COA7Q96BR5 231 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 CGRRF1Q99675 332 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 SSU72Q9NP77 194 aaKnown RBP3.24□□□□□ -1.89
XRN1-210ENST00000472697 L1RE1Q9UN81 338 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 PCDHA13Q9Y5I0 950 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 MRFAP1Q9Y605 127 aa3.24□□□□□ -1.89
XRN1-210ENST00000472697 TEX14Q8IWB6 1497 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ELOA3CA0A087WX78 387 aaPredicted RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 RRN3P2A6NIE6 340 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ELOA3DA6NLF2 546 aaPredicted RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 AQP7O14520 342 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 AURKAO14965 403 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ERC2O15083 957 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 GFPT2O94808 682 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 TNFRSF6BO95407 300 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ZBED1O96006 694 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 CAPN3P20807 821 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ASPAP45381 313 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 PREPP48147 710 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 MTNR1BP49286 362 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 PGS1Q32NB8 556 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ELOA3BQ3SY89 546 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 RTP2Q5QGT7 225 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 MSL1Q68DK7 614 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 CIAPIN1Q6FI81 312 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 CFAP161Q6P656 301 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ARHGAP36Q6ZRI8 547 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 FAM26EQ8N5C1 309 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 C2CD4AQ8NCU7 369 aaPredicted RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 FBXO18Q8NFZ0 1043 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ELOA3Q8NG57 546 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 SYTL5Q8TDW5 730 aaPredicted RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 ERP27Q96DN0 273 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 MYLK2Q9H1R3 596 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 SOX17Q9H6I2 414 aaPredicted RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 TRMT13Q9NUP7 481 aaKnown RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 GULP1Q9UBP9 304 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 NXF1Q9UBU9 619 aaKnown RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 CEP131Q9UPN4 1083 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 DIS3Q9Y2L1 958 aaKnown RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 NOC2LQ9Y3T9 749 aaKnown RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 PCDHB1Q9Y5F3 818 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 POM121BA6NF01 834 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 CCDC154A6NI56 674 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 FAM155AB1AL88 458 aaPredicted RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 MAN2B1O00754 1011 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 TUSC2O75896 110 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 CBX7O95931 251 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 EOMESO95936 686 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 EFEMP2O95967 443 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 IFIT1P09914 478 aaKnown RBP3.23□□□□□ -1.89
XRN1-210ENST00000472697 SLFN14P0C7P3 912 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 KITP10721 976 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 GLULP15104 373 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 GRK2P25098 689 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 HTR1BP28222 390 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ADH6P28332 368 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 GRK3P35626 688 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 SESN3P58005 492 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 GPR85P60893 370 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 MAP3K12Q12852 859 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 ADAM9Q13443 819 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 LAPTM5Q13571 262 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 USP45Q70EL2 814 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 CDC37L1Q7L3B6 337 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 C11orf74Q86VG3 221 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 MIER2Q8N344 545 aa3.23□□□□□ -1.89
XRN1-210ENST00000472697 SH2D3CQ8N5H7 860 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms