RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TSPYL6Q8N831 410 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 MFSD2AQ8NA29 543 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 KCT2Q8NC54 265 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 TDRD7Q8NHU6 1098 aaKnown RBP4.34□□□□□ -1.71
XRN1-209ENST00000472625 WDR66Q8TBY9 1149 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 RAET1EQ8TD07 263 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 FAM168AQ92567 244 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 CLMNQ96JQ2 1002 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 PRMT6Q96LA8 375 aaPredicted RBP4.34□□□□□ -1.71
XRN1-209ENST00000472625 ZDHHC15Q96MV8 337 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 UBP1Q9NZI7 540 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 REV1Q9UBZ9 1251 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 ZNF70Q9UC06 446 aaPredicted RBP4.34□□□□□ -1.71
XRN1-209ENST00000472625 MAPK8IP1Q9UQF2 711 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 NR2E3Q9Y5X4 410 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 CAPN6Q9Y6Q1 641 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 IRS2Q9Y4H2 1338 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 ARAP2Q8WZ64 1704 aa4.34□□□□□ -1.71
XRN1-209ENST00000472625 ECM29Q5VYK3 1845 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 UTYO14607 1347 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 TMEM265A0A087WTH1 108 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 TCP10L2B9ZVM9 353 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 VAMP4O75379 141 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 PDE8BO95263 885 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 HTR3BO95264 441 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 MAP4K4O95819 1239 aaPredicted RBP4.33□□□□□ -1.72
XRN1-209ENST00000472625 SLC5A1P13866 664 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 FOXO4P98177 505 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 RAD51AP2Q09MP3 1159 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 PABPC4Q13310 644 aaKnown RBP eCLIP4.33□□□□□ -1.72
XRN1-209ENST00000472625 RABL6Q3YEC7 729 aaPredicted RBP4.33□□□□□ -1.72
XRN1-209ENST00000472625 NOL9Q5SY16 702 aaKnown RBP4.33□□□□□ -1.72
XRN1-209ENST00000472625 SLC4A10Q6U841 1118 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 FASTKD5Q7L8L6 764 aaKnown RBP4.33□□□□□ -1.72
XRN1-209ENST00000472625 HS2ST1Q7LGA3 356 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 ANKRD23Q86SG2 305 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 SLFN12Q8IYM2 578 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 POU5F2Q8N7G0 328 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 TMEM87AQ8NBN3 555 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 BRI3BPQ8WY22 251 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 LPIN2Q92539 896 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 FAM84BQ96KN1 310 aaPredicted RBP4.33□□□□□ -1.72
XRN1-209ENST00000472625 MIPEPQ99797 713 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 TMEM39BQ9GZU3 492 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 TDRD3Q9H7E2 651 aaKnown RBP4.33□□□□□ -1.72
XRN1-209ENST00000472625 EHMT1Q9H9B1 1298 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 BRMS1Q9HCU9 246 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 SCAF8Q9UPN6 1271 aaKnown RBP4.33□□□□□ -1.72
XRN1-209ENST00000472625 SLC45A1Q9Y2W3 748 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 PCDHGB7Q9Y5F8 929 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 PTCH2Q9Y6C5 1203 aa4.33□□□□□ -1.72
XRN1-209ENST00000472625 SZT2Q5T011 3432 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 PDS5AQ29RF7 1337 aaKnown RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 MYPNQ86TC9 1320 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 ADGRA2Q96PE1 1338 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 SALL1Q9NSC2 1324 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 WASH4PA8MWX3 477 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 CXCL11O14625 94 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 TLR3O15455 904 aaKnown RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 PLIN1O60240 522 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 IGSF3O75054 1194 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 GJB1P08034 283 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 CT47B1P0C2W7 299 aaPredicted RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 PLCG1P19174 1290 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 GYG1P46976 350 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 JAG1P78504 1218 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 CLCQ05315 142 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 ZP2Q05996 745 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 EXOSC9Q06265 439 aaKnown RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 TNK2Q07912 1038 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 CHAF1AQ13111 956 aaPredicted RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 SNAP47Q5SQN1 464 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 CDKAL1Q5VV42 579 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 SPTY2D1Q68D10 685 aaPredicted RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 G2E3Q7L622 706 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 CDH24Q86UP0 819 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 RELL1Q8IUW5 271 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 SLITRK4Q8IW52 837 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 SMCR8Q8TEV9 937 aaPredicted RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 FAM151AQ8WW52 585 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 MRRFQ96E11 262 aaKnown RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 TEPSINQ96N21 525 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 PTPN18Q99952 460 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 NT5C1AQ9BXI3 368 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 R3HDMLQ9H3Y0 253 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 ANTXR1Q9H6X2 564 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 PRDM5Q9NQX1 630 aaPredicted RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 METTL5Q9NRN9 209 aaKnown RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 SRRDQ9UH36 339 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 GTF2IRD1Q9UHL9 959 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 GGT7Q9UJ14 662 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 DDX41Q9UJV9 622 aaKnown RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 DENND2AQ9ULE3 1009 aa4.32□□□□□ -1.72
XRN1-209ENST00000472625 ZNF646O15015 1829 aaPredicted RBP4.32□□□□□ -1.72
XRN1-209ENST00000472625 CACNA1FO60840 1977 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 SPEF2Q9C093 1822 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 WTIPA6NIX2 430 aaPredicted RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 SLC22A31A6NKX4 558 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 BTBD19C9JJ37 291 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 E9PSI1 815 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms