RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 IGBP1P78318 339 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 ADAM17P78536 824 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 ZNF200P98182 395 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-211ENST00000472490 ZNF174Q15697 407 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 LRRC8DQ7L1W4 858 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 TDHQ8IZJ6 230 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 PRO3102Q9H379 93 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 MYH7BA7E2Y1 1941 aa15.97■□□□□ 0.15
BRCA1-211ENST00000472490 OATP04181 439 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 OR52Z1P0C646 297 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 SYT1P21579 422 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 THPOP40225 353 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 QARSP47897 775 aaKnown RBP15.96■□□□□ 0.15
BRCA1-211ENST00000472490 HIC1Q14526 733 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 EPHA7Q15375 998 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 TMEM266Q2M3C6 531 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 NCAPH2Q6IBW4 605 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 PSRC1Q6PGN9 363 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-211ENST00000472490 RPAINQ86UA6 219 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 NEK9Q8TD19 979 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 RAB34Q9BZG1 259 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 MTIF3Q9H2K0 278 aaKnown RBP15.96■□□□□ 0.15
BRCA1-211ENST00000472490 IL23AQ9NPF7 189 aa15.96■□□□□ 0.15
BRCA1-211ENST00000472490 WNT7AO00755 349 aa15.95■□□□□ 0.14
BRCA1-211ENST00000472490 PRKCEQ02156 737 aa15.95■□□□□ 0.14
BRCA1-211ENST00000472490 XKR3Q5GH77 459 aa15.95■□□□□ 0.14
BRCA1-211ENST00000472490 MARCH8Q5T0T0 291 aa15.95■□□□□ 0.14
BRCA1-211ENST00000472490 DHX38Q92620 1227 aaKnown RBP15.95■□□□□ 0.14
BRCA1-211ENST00000472490 WNT8AQ9H1J5 351 aa15.95■□□□□ 0.14
BRCA1-211ENST00000472490 PCDHA2Q9Y5H9 948 aa15.95■□□□□ 0.14
BRCA1-211ENST00000472490 STK24Q9Y6E0 443 aa15.95■□□□□ 0.14
BRCA1-211ENST00000472490 UMODL1Q5DID0 1318 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 RSPH10B2B2RC85 870 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 EML1O00423 815 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 MAGEB2O15479 319 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 BMP15O95972 392 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 RSPH10BP0C881 870 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 ATP4AP20648 1035 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 KLRC1P26715 233 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 TOB1P50616 345 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-211ENST00000472490 SPIRE1Q08AE8 756 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 BECN1Q14457 450 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 TRIM71Q2Q1W2 868 aaKnown RBP15.94■□□□□ 0.14
BRCA1-211ENST00000472490 IER5Q5VY09 327 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 MTHFD1LQ6UB35 978 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 OTUD6AQ7L8S5 288 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 TRMT1LQ7Z2T5 733 aaKnown RBP15.94■□□□□ 0.14
BRCA1-211ENST00000472490 NME8Q8N427 588 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 ERMNQ8TAM6 284 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 SCLYQ96I15 445 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 TMEM60Q9H2L4 133 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 ZSWIM4Q9H7M6 989 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 PCDHB6Q9Y5E3 794 aa15.94■□□□□ 0.14
BRCA1-211ENST00000472490 SMIM35A0A1B0GVV1 85 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 M0QZ92 97 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 STX6O43752 255 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 ZNF862O60290 1169 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 FGBP02675 491 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 ACTN1P12814 892 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 TMOD1P28289 359 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 PRPHP41219 470 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 TECP42680 631 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 PTGDRQ13258 359 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 ZNF618Q5T7W0 954 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 C4orf19Q8IY42 314 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 EXOC8Q8IYI6 725 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 BANK1Q8NDB2 785 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 NIFKQ9BYG3 293 aaKnown RBP15.93■□□□□ 0.14
BRCA1-211ENST00000472490 FTOQ9C0B1 505 aaKnown RBP eCLIP15.93■□□□□ 0.14
BRCA1-211ENST00000472490 ZSCAN16Q9H4T2 348 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-211ENST00000472490 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.93■□□□□ 0.14
BRCA1-211ENST00000472490 SEPT9Q9UHD8 586 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-211ENST00000472490 PPME1Q9Y570 386 aa15.93■□□□□ 0.14
BRCA1-211ENST00000472490 FXR2P51116 673 aaKnown RBP eCLIP15.92■□□□□ 0.14
BRCA1-211ENST00000472490 PDIA5Q14554 519 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 NBR1Q14596 966 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 UGCGQ16739 394 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 HABP4Q5JVS0 413 aaKnown RBP15.92■□□□□ 0.14
BRCA1-211ENST00000472490 HAUS3Q68CZ6 603 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 DEFB128Q7Z7B8 93 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 TRAPPC12Q8WVT3 735 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 DNAJB3Q8WWF6 145 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 WNT8BQ93098 351 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 RNPC3Q96LT9 517 aaKnown RBP15.92■□□□□ 0.14
BRCA1-211ENST00000472490 EIF2AK1Q9BQI3 630 aaKnown RBP15.92■□□□□ 0.14
BRCA1-211ENST00000472490 JPH2Q9BR39 696 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-211ENST00000472490 LXNQ9BS40 222 aa15.92■□□□□ 0.14
BRCA1-211ENST00000472490 DDX11L8A8MPP1 907 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 ACRP10323 421 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 EPHB4P54760 987 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 TBC1D8BQ0IIM8 1120 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 SHHQ15465 462 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 FAM26DQ5JW98 314 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 TMEM240Q5SV17 173 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 ARL6IP4Q66PJ3 421 aaKnown RBP15.91■□□□□ 0.14
BRCA1-211ENST00000472490 DTHD1Q6ZMT9 781 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 RUFY4Q6ZNE9 571 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 ZNF365Q70YC5 407 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 FERMT3Q86UX7 667 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms