RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SPON2Q9BUD6 331 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DSCC1Q9BVC3 393 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DYRK4Q9NR20 520 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NDFIP2Q9NV92 336 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PSMA2P25787 234 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ARL4DP49703 201 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NBPF20Q3BBV1 942 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NBPF10Q6P3W6 841 aaKnown RBP14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 RINLQ6ZS11 566 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GRAMD1CQ8IYS0 662 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PIGOQ8TEQ8 1089 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TRIM4Q9C037 500 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 E9PMD0 336 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 FTCDO95954 541 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SERPINB2P05120 415 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PDXDC1Q6P996 788 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 YAF2Q8IY57 180 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MSTO1Q9BUK6 570 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GINM1Q9NU53 330 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KIF17Q9P2E2 1029 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 FARP1Q9Y4F1 1045 aaPredicted RBP14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 UPP2O95045 317 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ACSL3O95573 720 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PSMC1P62191 440 aaKnown RBP14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KRT77Q7Z794 578 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SERPINB13Q9UIV8 391 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 AFPP02771 609 aaKnown RBP14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 C2orf54Q08AI8 447 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DDX42Q86XP3 938 aaKnown RBP eCLIP14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TRPC7Q9HCX4 862 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 C6orf203Q9P0P8 240 aaPredicted RBP14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TEX28O15482 410 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MCTP2Q6DN12 878 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 B4GALNT2Q8NHY0 566 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ZFP42Q96MM3 310 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 XDHP47989 1333 aa14.2□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 EXOC1LA0A1B0GW35 172 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ARHGEF37A1IGU5 675 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GTSE1Q9NYZ3 720 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CNOT7Q9UIV1 285 aaKnown RBP14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PPP2R2CQ9Y2T4 447 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 UBA6A0AVT1 1052 aaPredicted RBP14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PYROXD1Q8WU10 500 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CCDC90BQ9GZT6 254 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 FBXO2Q9UK22 296 aaPredicted RBP14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MAP2K2P36507 400 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CYP27A1Q02318 531 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SLC26A7Q8TE54 656 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 FAF2Q96CS3 445 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 EGFL8Q99944 293 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 VMP1Q96GC9 406 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SIK2Q9H0K1 926 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MED23Q9ULK4 1368 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NDUFB5O43674 189 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CTTNQ14247 550 aaKnown RBP14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 POLD4Q9HCU8 107 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SEC31BQ9NQW1 1179 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TRPC5Q9UL62 973 aaPredicted RBP14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 USP17L8P0C7I0 530 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SLC9A1P19634 815 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GRAMD1BQ3KR37 738 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GPATCH4Q5T3I0 446 aaKnown RBP14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PLEKHM3Q6ZWE6 761 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PPP1R36Q96LQ0 422 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 AP1M1Q9BXS5 423 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CASS4Q9NQ75 786 aa14.19□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DIAPH2O60879 1101 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PAMP19021 973 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KCTD17Q8N5Z5 321 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ZBTB7AO95365 584 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MOCS2O96007 188 aaPredicted RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CASP14P31944 242 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MRPS25P82663 173 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PARVGQ9HBI0 331 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MRPL47Q9HD33 250 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CYP2D7A0A087X1C5 515 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ASMTLO95671 621 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ATP5JP18859 108 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 HDLBPQ00341 1268 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 UBE3AQ05086 875 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KIAA1755Q5JYT7 1200 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GOLGA8KD6RF30 607 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TCP1P17987 556 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CENPAP49450 140 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ASPRV1Q53RT3 343 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SYDE2Q5VT97 1194 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 URGCPQ8TCY9 931 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 USP17L3A6NCW0 530 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 USP17L4A6NCW7 530 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GSNP06396 782 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 USP17L1Q7RTZ2 530 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ENOX1Q8TC92 643 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PIGSQ96S52 555 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 EIF3CLB5ME19 914 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PSAPP07602 524 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 HSPA8P11142 646 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms