RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PABPC4Q13310 644 aaKnown RBP eCLIP5.95□□□□□ -1.46
COL9A1-206ENST00000470652 RTP5Q14D33 572 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 SKIDA1Q1XH10 827 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 RGL3Q3MIN7 710 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 TMEM177Q53S58 311 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 ZCCHC8Q6NZY4 707 aaKnown RBP5.95□□□□□ -1.46
COL9A1-206ENST00000470652 FAM124AQ86V42 546 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 C2orf69Q8N8R5 385 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 IGDCC4Q8TDY8 1250 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 FANCLQ9NW38 375 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 ARHGAP20Q9P2F6 1191 aa5.95□□□□□ -1.46
COL9A1-206ENST00000470652 MRPL42Q9Y6G3 142 aaKnown RBP5.95□□□□□ -1.46
COL9A1-206ENST00000470652 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 LOC105371045A0A1W2PR82 267 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 SLC12A8A0AV02 714 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 C9orf118A6NHY6 69 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 ZNF839A8K0R7 811 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 KCNK3O14649 394 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 CDC45O75419 566 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 DNAJC8O75937 253 aaPredicted RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 FBXO21O94952 628 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 CYP1A1P04798 512 aaPredicted RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 INSRRP14616 1297 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 ARHGAP44Q17R89 818 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 SPATS1Q496A3 300 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 MCTP2Q6DN12 878 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 UBE2R2Q712K3 238 aaPredicted RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 TXNDC5Q8NBS9 432 aaKnown RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 LCORQ96JN0 433 aaPredicted RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 BDH2Q9BUT1 245 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 INTS7Q9NVH2 962 aaKnown RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 SAMD15Q9P1V8 674 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 ARHGAP28Q9P2N2 729 aa5.94□□□□□ -1.46
COL9A1-206ENST00000470652 MAGEC2Q9UBF1 373 aaPredicted RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 TNPO3Q9Y5L0 923 aaKnown RBP5.94□□□□□ -1.46
COL9A1-206ENST00000470652 KIF27Q86VH2 1401 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 PRAMEF25A6NGN4 478 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 SCDO00767 359 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 HIP1RO75146 1068 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 C4BPAP04003 597 aaKnown RBP5.93□□□□□ -1.46
COL9A1-206ENST00000470652 SDSP20132 328 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 SMAD2Q15796 467 aaKnown RBP5.93□□□□□ -1.46
COL9A1-206ENST00000470652 CPZQ66K79 652 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 TRMT10BQ6PF06 316 aaKnown RBP5.93□□□□□ -1.46
COL9A1-206ENST00000470652 JAZF1Q86VZ6 243 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 NOSTRINQ8IVI9 506 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 TMEM168Q9H0V1 697 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 KCNH7Q9NS40 1196 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 FTSJ1Q9UET6 329 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 ZFP69BQ9UJL9 534 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 CD2APQ9Y5K6 639 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 RAPGEF2Q9Y4G8 1499 aa5.93□□□□□ -1.46
COL9A1-206ENST00000470652 GRIN2BQ13224 1484 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 MROH6A6NGR9 719 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 M0R2C6 588 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 JMJD7P0C870 316 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 RANGAP1P46060 587 aaPredicted RBP5.92□□□□□ -1.46
COL9A1-206ENST00000470652 GLRBP48167 497 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 EFEMP1Q12805 493 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 ZNF460Q14592 562 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 PUM1Q14671 1186 aaKnown RBP eCLIP5.92□□□□□ -1.46
COL9A1-206ENST00000470652 ZFYVE27Q5T4F4 411 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 PKN3Q6P5Z2 889 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 BORAQ6PGQ7 559 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 DPP8Q6V1X1 898 aaPredicted RBP5.92□□□□□ -1.46
COL9A1-206ENST00000470652 OTOP1Q7RTM1 612 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 ZCCHC14Q8WYQ9 949 aaKnown RBP5.92□□□□□ -1.46
COL9A1-206ENST00000470652 NINJ1Q92982 152 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 WNK4Q96J92 1243 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 YTHDC1Q96MU7 727 aaKnown RBP5.92□□□□□ -1.46
COL9A1-206ENST00000470652 BOCQ9BWV1 1114 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 CABP5Q9NP86 173 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 SLC39A2Q9NP94 309 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 KCND1Q9NSA2 647 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 B3GALT1Q9Y5Z6 326 aa5.92□□□□□ -1.46
COL9A1-206ENST00000470652 GLRX3O76003 335 aaKnown RBP5.91□□□□□ -1.46
COL9A1-206ENST00000470652 KNG1P01042 644 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 COL6A1P12109 1028 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 PTGS1P23219 599 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 AOAHP28039 575 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 MECP2P51608 486 aaKnown RBP5.91□□□□□ -1.46
COL9A1-206ENST00000470652 IRF9Q00978 393 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 SEC23AQ15436 765 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 PHF19Q5T6S3 580 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 STPG3Q8N7X2 389 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 CHST14Q8NCH0 376 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 DLG3Q92796 817 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 FEZ1Q99689 392 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 TACO1Q9BSH4 297 aaKnown RBP5.91□□□□□ -1.46
COL9A1-206ENST00000470652 BARX1Q9HBU1 254 aaPredicted RBP5.91□□□□□ -1.46
COL9A1-206ENST00000470652 INCENPQ9NQS7 918 aa5.91□□□□□ -1.46
COL9A1-206ENST00000470652 ERICH3Q5RHP9 1530 aa5.9□□□□□ -1.46
COL9A1-206ENST00000470652 CEP170Q5SW79 1584 aa5.9□□□□□ -1.46
COL9A1-206ENST00000470652 ENPP3O14638 875 aa5.9□□□□□ -1.46
COL9A1-206ENST00000470652 PRICKLE3O43900 615 aaPredicted RBP5.9□□□□□ -1.46
COL9A1-206ENST00000470652 IL18BPO95998 194 aa5.9□□□□□ -1.46
COL9A1-206ENST00000470652 ZBTB48P10074 688 aaPredicted RBP5.9□□□□□ -1.46
COL9A1-206ENST00000470652 SDHAP31040 664 aa5.9□□□□□ -1.46
COL9A1-206ENST00000470652 TKFCQ3LXA3 575 aa5.9□□□□□ -1.46
COL9A1-206ENST00000470652 CFAP100Q494V2 611 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms