RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 VPS53Q5VIR6 699 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 PLPP4Q5VZY2 271 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 ZKSCAN2Q63HK3 967 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 ADGRD1Q6QNK2 874 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 CLASRPQ8N2M8 674 aaKnown RBP9.62□□□□□ -0.87
LSM2-210ENST00000470086 DDX12PQ92771 950 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 KIF1BPQ96EK5 621 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 PLVAPQ9BX97 442 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 RWDD3Q9Y3V2 267 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 MRVI1Q9Y6F6 885 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 COL4A2P08572 1712 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 NBEAQ8NFP9 2946 aa9.62□□□□□ -0.87
LSM2-210ENST00000470086 FAM208BQ5VWN6 2430 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 TSPY2A6NKD2 308 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 NARSO43776 548 aaKnown RBP9.61□□□□□ -0.87
LSM2-210ENST00000470086 SNHG28P0DPA3 235 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 CD52P31358 61 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 PBX3P40426 434 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 ZNF543Q08ER8 600 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 CELF3Q5SZQ8 465 aaKnown RBP9.61□□□□□ -0.87
LSM2-210ENST00000470086 CMTR2Q8IYT2 770 aaKnown RBP9.61□□□□□ -0.87
LSM2-210ENST00000470086 KBTBD3Q8NAB2 608 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 CYP2W1Q8TAV3 490 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 PANK1Q8TE04 598 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 APBB2Q92870 758 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 SPATA33Q96N06 139 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 NEK1Q96PY6 1258 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 TLE6Q9H808 572 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 ERVK-5Q9HDB9 667 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 PXMP2Q9NR77 195 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 ZFYVE26Q68DK2 2539 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 LAMA1P25391 3075 aa9.61□□□□□ -0.87
LSM2-210ENST00000470086 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
LSM2-210ENST00000470086 H3BRB1 525 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 MGEA5O60502 916 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 PPP1R11O60927 126 aaPredicted RBP9.6□□□□□ -0.87
LSM2-210ENST00000470086 LMNAP02545 664 aaKnown RBP9.6□□□□□ -0.87
LSM2-210ENST00000470086 IBSPP21815 317 aaPredicted RBP9.6□□□□□ -0.87
LSM2-210ENST00000470086 CDC37Q16543 378 aaPredicted RBP9.6□□□□□ -0.87
LSM2-210ENST00000470086 FBXO47Q5MNV8 452 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 C12orf76Q8N812 135 aaPredicted RBP9.6□□□□□ -0.87
LSM2-210ENST00000470086 DTWD2Q8NBA8 298 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 RMDN3Q96TC7 470 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 UBA5Q9GZZ9 404 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 TMX1Q9H3N1 280 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 TUT1Q9H6E5 874 aaKnown RBP9.6□□□□□ -0.87
LSM2-210ENST00000470086 AAASQ9NRG9 546 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 LAMA5O15230 3695 aa9.6□□□□□ -0.87
LSM2-210ENST00000470086 CCDC171Q6TFL3 1326 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 MTCL1Q9Y4B5 1905 aaKnown RBP9.59□□□□□ -0.87
LSM2-210ENST00000470086 KRBA1A5PL33 1030 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 PPP1R3GB7ZBB8 358 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 IPO8O15397 1037 aaKnown RBP9.59□□□□□ -0.87
LSM2-210ENST00000470086 RNF113AO15541 343 aaKnown RBP9.59□□□□□ -0.87
LSM2-210ENST00000470086 HRO43593 1189 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 APPP05067 770 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 NR3C2P08235 984 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 CLCN5P51795 746 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 ARHGAP4P98171 946 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 LAMC2Q13753 1193 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 STXBP2Q15833 593 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 TMEM184AQ6ZMB5 413 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 UBALD2Q8IYN6 164 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 SUMF1Q8NBK3 374 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 PDCD2LQ9BRP1 358 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 MFSD1Q9H3U5 465 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 CDY2AQ9Y6F7 541 aa9.59□□□□□ -0.87
LSM2-210ENST00000470086 AKAP13Q12802 2813 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 PATL2C9JE40 543 aaKnown RBP9.58□□□□□ -0.88
LSM2-210ENST00000470086 RANBP6O60518 1105 aaKnown RBP9.58□□□□□ -0.88
LSM2-210ENST00000470086 CAND2O75155 1236 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 LRRN2O75325 713 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 FGF18O76093 207 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 GLULP15104 373 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 ATXN1P54253 815 aaKnown RBP9.58□□□□□ -0.88
LSM2-210ENST00000470086 PGM5Q15124 567 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 SLC35G1Q2M3R5 365 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 QRICH1Q2TAL8 776 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 MARCH8Q5T0T0 291 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 MAML2Q8IZL2 1156 aaPredicted RBP9.58□□□□□ -0.88
LSM2-210ENST00000470086 COLGALT1Q8NBJ5 622 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 KCNG4Q8TDN1 519 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 NSUN6Q8TEA1 469 aaKnown RBP9.58□□□□□ -0.88
LSM2-210ENST00000470086 NAPBQ9H115 298 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 CWH43Q9H720 699 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 LIMD1Q9UGP4 676 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 VPS9D1Q9Y2B5 631 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 PKD1L2Q7Z442 2459 aa9.58□□□□□ -0.88
LSM2-210ENST00000470086 DCDC2BA2VCK2 349 aa9.57□□□□□ -0.88
LSM2-210ENST00000470086 N4BP1O75113 896 aaKnown RBP9.57□□□□□ -0.88
LSM2-210ENST00000470086 PPFIA4O75335 1185 aa9.57□□□□□ -0.88
LSM2-210ENST00000470086 MYCLP12524 364 aaPredicted RBP9.57□□□□□ -0.88
LSM2-210ENST00000470086 HOXA13P31271 388 aaPredicted RBP9.57□□□□□ -0.88
LSM2-210ENST00000470086 TMEM62Q0P6H9 643 aa9.57□□□□□ -0.88
LSM2-210ENST00000470086 NBR1Q14596 966 aa9.57□□□□□ -0.88
LSM2-210ENST00000470086 TMEM266Q2M3C6 531 aa9.57□□□□□ -0.88
LSM2-210ENST00000470086 FAM102BQ5T8I3 360 aa9.57□□□□□ -0.88
LSM2-210ENST00000470086 ARHGEF16Q5VV41 709 aa9.57□□□□□ -0.88
LSM2-210ENST00000470086 ZSCAN25Q6NSZ9 544 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms