RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 IGLV3-22A0A075B6J6 115 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 POTEB3A0JP26 581 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 MEIS1O00470 390 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 LINC01565O15544 149 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 MGEA5O60502 916 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 DGKIO75912 1065 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 DNAJB1P25685 340 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 ADD1P35611 737 aaKnown RBP23.51■■□□□ 1.35
COL6A1-203ENST00000466285 BMPR1AP36894 532 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 CLUL1Q15846 466 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 PAN2Q504Q3 1202 aaKnown RBP23.51■■□□□ 1.35
COL6A1-203ENST00000466285 JAKMIP3Q5VZ66 844 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 POTEBQ6S5H4 581 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 EP400NLQ6ZTU2 488 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 RSPH3Q86UC2 560 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 TMEM40Q8WWA1 233 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 CRYGNQ8WXF5 182 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 CLP1Q92989 425 aaKnown RBP23.51■■□□□ 1.35
COL6A1-203ENST00000466285 PABPC5Q96DU9 382 aaKnown RBP23.51■■□□□ 1.35
COL6A1-203ENST00000466285 CDHR5Q9HBB8 845 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 ALG13Q9NP73 1137 aaKnown RBP23.51■■□□□ 1.35
COL6A1-203ENST00000466285 HCSTQ9UBK5 93 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 PADI3Q9ULW8 664 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 IGSF9BQ9UPX0 1349 aa23.51■■□□□ 1.35
COL6A1-203ENST00000466285 IGKV6D-21A0A0A0MT36 114 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 ZBTB42B2RXF5 422 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 MAFGO15525 162 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 ATG7O95352 703 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 ATP4AP20648 1035 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 IBSPP21815 317 aaPredicted RBP23.5■■□□□ 1.35
COL6A1-203ENST00000466285 APOBRQ0VD83 1088 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 BTG3Q14201 252 aaPredicted RBP23.5■■□□□ 1.35
COL6A1-203ENST00000466285 GJD3Q8N144 294 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 PPP1R16BQ96T49 567 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 SDF4Q9BRK5 362 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 AZI2Q9H6S1 392 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 CLDND1Q9NY35 253 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 PCDHGC5Q9Y5F6 944 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 PCDHA2Q9Y5H9 948 aa23.5■■□□□ 1.35
COL6A1-203ENST00000466285 RRN3P2A6NIE6 340 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 DHX15O43143 795 aaKnown RBP23.49■■□□□ 1.35
COL6A1-203ENST00000466285 TBX10O75333 385 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 PLA2G5P39877 138 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 STAT5BP51692 787 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 TSGA10IPQ3SY00 556 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 RNF20Q5VTR2 975 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 MTHFD1LQ6UB35 978 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 ABHD15Q6UXT9 468 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 SYNE3Q6ZMZ3 975 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 RASGRP4Q8TDF6 673 aa23.49■■□□□ 1.35
COL6A1-203ENST00000466285 PKN1Q16512 942 aa23.48■■□□□ 1.35
COL6A1-203ENST00000466285 TMEM31Q5JXX7 168 aa23.48■■□□□ 1.35
COL6A1-203ENST00000466285 PLPPR4Q7Z2D5 763 aa23.48■■□□□ 1.35
COL6A1-203ENST00000466285 ADGRD2Q7Z7M1 963 aa23.48■■□□□ 1.35
COL6A1-203ENST00000466285 CELF4Q9BZC1 486 aaKnown RBP23.48■■□□□ 1.35
COL6A1-203ENST00000466285 NAP1L2Q9ULW6 460 aaPredicted RBP23.48■■□□□ 1.35
COL6A1-203ENST00000466285 TRIOO75962 3097 aa23.48■■□□□ 1.35
COL6A1-203ENST00000466285 PI4K2BG5E9Z4 385 aa23.47■■□□□ 1.35
COL6A1-203ENST00000466285 CDC45O75419 566 aa23.47■■□□□ 1.35
COL6A1-203ENST00000466285 IRS1P35568 1242 aa23.47■■□□□ 1.35
COL6A1-203ENST00000466285 AP3B2Q13367 1082 aa23.47■■□□□ 1.35
COL6A1-203ENST00000466285 PFKFB3Q16875 520 aaPredicted RBP23.47■■□□□ 1.35
COL6A1-203ENST00000466285 PLA2G4DQ86XP0 818 aa23.47■■□□□ 1.35
COL6A1-203ENST00000466285 C11orf84Q9BUA3 381 aaPredicted RBP23.47■■□□□ 1.35
COL6A1-203ENST00000466285 SMIM35A0A1B0GVV1 85 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 EDIL3O43854 480 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 FOSP01100 380 aaPredicted RBP23.46■■□□□ 1.35
COL6A1-203ENST00000466285 MMP1P03956 469 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 ITGB1P05556 798 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 SSTR3P32745 418 aaPredicted RBP23.46■■□□□ 1.35
COL6A1-203ENST00000466285 ZP2Q05996 745 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 PAK2Q13177 524 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 NID2Q14112 1375 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 CTC1Q2NKJ3 1217 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 CENPQQ7L2Z9 268 aaPredicted RBP23.46■■□□□ 1.35
COL6A1-203ENST00000466285 ERVK-5Q9HDB9 667 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 GINS2Q9Y248 185 aa23.46■■□□□ 1.35
COL6A1-203ENST00000466285 NOC2LQ9Y3T9 749 aaKnown RBP23.46■■□□□ 1.35
COL6A1-203ENST00000466285 KDM3AQ9Y4C1 1321 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 BACH1O14867 736 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 SCG2P13521 617 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 KLRC1P26715 233 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 METAP2P50579 478 aaKnown RBP eCLIP23.45■■□□□ 1.34
COL6A1-203ENST00000466285 IER5Q5VY09 327 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 Q6ZUG5 572 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 NPAS4Q8IUM7 802 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 KIAA0319LQ8IZA0 1049 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 ATP8B4Q8TF62 1192 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 BRF1Q92994 677 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 PHKBQ93100 1093 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 JAKMIP1Q96N16 626 aaKnown RBP23.45■■□□□ 1.34
COL6A1-203ENST00000466285 PLAGL2Q9UPG8 496 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 SNX14Q9Y5W7 946 aa23.45■■□□□ 1.34
COL6A1-203ENST00000466285 hCG_1984214I3L0E3 225 aa23.44■■□□□ 1.34
COL6A1-203ENST00000466285 GPR37L1O60883 481 aa23.44■■□□□ 1.34
COL6A1-203ENST00000466285 RB1P06400 928 aa23.44■■□□□ 1.34
COL6A1-203ENST00000466285 KRT76Q01546 638 aa23.44■■□□□ 1.34
COL6A1-203ENST00000466285 TRMT1LQ7Z2T5 733 aaKnown RBP23.44■■□□□ 1.34
COL6A1-203ENST00000466285 CMTR2Q8IYT2 770 aaKnown RBP23.44■■□□□ 1.34
COL6A1-203ENST00000466285 ZNF713Q8N859 430 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms