RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 LRRTM3Q86VH5 581 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 HID1Q8IV36 788 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 PHACTR4Q8IZ21 702 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 LRRN4CLQ8ND94 238 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 SLC7A14Q8TBB6 771 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 UBASH3BQ8TF42 649 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 GOLGA1Q92805 767 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 RPGRQ92834 1020 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 TRIM44Q96DX7 344 aaPredicted RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 DHRS1Q96LJ7 313 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 HERPUD2Q9BSE4 406 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 MRPL4Q9BYD3 311 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 MAPRE3Q9UPY8 281 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 RGPD3A6NKT7 1758 aaPredicted RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 RGPD4Q7Z3J3 1758 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 TJP1Q07157 1748 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 LAMB4A4D0S4 1761 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 H0YIN7 160 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 POLRMTO00411 1230 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 PRODHO43272 600 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 ORC4O43929 436 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 FGFR1P11362 822 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 PABPC1P11940 636 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 SARSP49591 514 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 NEK2P51955 445 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 YARSP54577 528 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 IFIT5Q13325 482 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 PUM3Q15397 648 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 BBS9Q3SYG4 887 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 CT47A1Q5JQC4 288 aaPredicted RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 C20orf194Q5TEA3 1177 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 LHFPL2Q6ZUX7 228 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 AMIGO3Q86WK7 504 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 ZNF354CQ86Y25 554 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 DMRTC2Q8IXT2 367 aaPredicted RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 RPAP2Q8IXW5 612 aaPredicted RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 GOLGA6L1Q8N7Z2 621 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 RNF214Q8ND24 703 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 LSM14AQ8ND56 463 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 DDX1Q92499 740 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 ACDQ96AP0 544 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 RBM17Q96I25 401 aaKnown RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 MPP4Q96JB8 637 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 CCDC74BQ96LY2 380 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 FANCD2OSQ96PS1 177 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 BRIP1Q9BX63 1249 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 USP44Q9H0E7 712 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 CDH19Q9H159 772 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 RWDD1Q9H446 243 aaPredicted RBP7.35□□□□□ -1.23
SFPQ-203ENST00000466213 TRIM39Q9HCM9 518 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 TNNQ9UQP3 1299 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 SLC45A1Q9Y2W3 748 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 ZNF451Q9Y4E5 1061 aa7.35□□□□□ -1.23
SFPQ-203ENST00000466213 CDHR2Q9BYE9 1310 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 PXDNLA1KZ92 1463 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 DNAJC25-GNG10A0A024R161 153 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 ANKRD18BA2A2Z9 1011 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 AGRPO00253 132 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 DLL1O00548 723 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 SHOXO15266 292 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 FIBPO43427 364 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 NTSR2O95665 410 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 NBPF7P0C2Y1 421 aaPredicted RBP7.34□□□□□ -1.23
SFPQ-203ENST00000466213 TGFB3P10600 412 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 ALDH1B1P30837 517 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 CD68P34810 354 aaPredicted RBP7.34□□□□□ -1.23
SFPQ-203ENST00000466213 IGHMBP2P38935 993 aaKnown RBP7.34□□□□□ -1.23
SFPQ-203ENST00000466213 PICALMQ13492 652 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 SLC10A5Q5PT55 438 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 EXOSC6Q5RKV6 272 aaKnown RBP7.34□□□□□ -1.23
SFPQ-203ENST00000466213 FAM102BQ5T8I3 360 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 HEATR6Q6AI08 1181 aaKnown RBP7.34□□□□□ -1.23
SFPQ-203ENST00000466213 PRR5LQ6MZQ0 368 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 LMBR1LQ6UX01 489 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 CHCHD4Q8N4Q1 142 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 VPS37AQ8NEZ2 397 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 EXOC6Q8TAG9 804 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 ZNF507Q8TCN5 953 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 PPP1R13LQ8WUF5 828 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 MRGPRX3Q96LB0 322 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 MPHOSPH8Q99549 860 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 MEIS3Q99687 375 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 ISY1Q9ULR0 285 aaKnown RBP7.34□□□□□ -1.23
SFPQ-203ENST00000466213 DAAM1Q9Y4D1 1078 aa7.34□□□□□ -1.23
SFPQ-203ENST00000466213 LRRFIP2Q9Y608 721 aaKnown RBP7.34□□□□□ -1.23
SFPQ-203ENST00000466213 CICQ96RK0 1608 aaPredicted RBP7.33□□□□□ -1.24
SFPQ-203ENST00000466213 SRGAP3O43295 1099 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 MTA2O94776 668 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 NID1P14543 1247 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 GBP1P32455 592 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 PEX19P40855 299 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 CTSWP56202 376 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 G3BP1Q13283 466 aaKnown RBP eCLIP7.33□□□□□ -1.24
SFPQ-203ENST00000466213 PIN1Q13526 163 aaPredicted RBP7.33□□□□□ -1.24
SFPQ-203ENST00000466213 PDE1CQ14123 709 aaPredicted RBP7.33□□□□□ -1.24
SFPQ-203ENST00000466213 MLC1Q15049 377 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 PCBP1Q15365 356 aaKnown RBP eCLIP7.33□□□□□ -1.24
SFPQ-203ENST00000466213 TAF11Q15544 211 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 TRIM61Q5EBN2 209 aa7.33□□□□□ -1.24
SFPQ-203ENST00000466213 NSMFQ6X4W1 530 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms