RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 KIAA1328Q86T90 577 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 LARP4BQ92615 738 aaKnown RBP13.73□□□□□ -0.21
COL4A6-204ENST00000461897 RAD54LQ92698 747 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 LACRTQ9GZZ8 138 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 TAF1DQ9H5J8 278 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-204ENST00000461897 EHMT1Q9H9B1 1298 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 TMOD4Q9NZQ9 345 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 FAN1Q9Y2M0 1017 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 RIPK3Q9Y572 518 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 CSADQ9Y600 493 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 PVALEFA0A1B0GWK0 134 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 RCCD1A6NED2 376 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 POTECB2RU33 542 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 HSP90B2PQ58FF3 399 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 HDAC6Q9UBN7 1215 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 ZNF214Q9UL59 606 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 PLAGL2Q9UPG8 496 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 A0A0G2JMZ2 1700 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 CAPN2P17655 700 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 IREB2P48200 963 aaKnown RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 RPS6P62753 249 aaKnown RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 COG2Q14746 738 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 IQCEQ6IPM2 695 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 MOB2Q70IA6 237 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 SV2BQ7L1I2 683 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 IL31RAQ8NI17 732 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 SYTL5Q8TDW5 730 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 CLMNQ96JQ2 1002 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 TRERF1Q96PN7 1200 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 NOC4LQ9BVI4 516 aaKnown RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 PNMA2Q9UL42 364 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 CTDP1Q9Y5B0 961 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-204ENST00000461897 FRMPD4Q14CM0 1322 aa13.72□□□□□ -0.21
COL4A6-204ENST00000461897 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 MYMKA6NI61 221 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 SPDYE16A6NNV3 312 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-204ENST00000461897 ENC1O14682 589 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 GRIN3BO60391 1043 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 MED24O75448 989 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 PRPF6O94906 941 aaKnown RBP13.71□□□□□ -0.21
COL4A6-204ENST00000461897 OAZ1P54368 228 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 ASIC1P78348 528 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 TMEM132BQ14DG7 1078 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 FKBP15Q5T1M5 1219 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 MMGT1Q8N4V1 131 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 KIAA0895Q8NCT3 520 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 TRIM58Q8NG06 486 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 COG1Q8WTW3 980 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 EDEM3Q9BZQ6 932 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 ELP3Q9H9T3 547 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 RNF146Q9NTX7 359 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 MAP3K20Q9NYL2 800 aaKnown RBP13.71□□□□□ -0.21
COL4A6-204ENST00000461897 HPCAL4Q9UM19 191 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 JRKLQ9Y4A0 524 aa13.71□□□□□ -0.21
COL4A6-204ENST00000461897 MEIS1O00470 390 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 ZNF263O14978 683 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SLC26A4O43511 780 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SYF2O95926 243 aaKnown RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 MTIF2P46199 727 aaKnown RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 KIF5AQ12840 1032 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 EAPPQ56P03 285 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 TREML2Q5T2D2 321 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 HAUS3Q68CZ6 603 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SNRNP48Q6IEG0 339 aaKnown RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 UNC13DQ70J99 1090 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SAMD3Q8N6K7 520 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SLC5A5Q92911 643 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SEMA6BQ9H3T3 888 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 MYPNQ86TC9 1320 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 PES1O00541 588 aaKnown RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 IRF6O14896 467 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 PSMD10O75832 226 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SPATA31C1P0DKV0 1188 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 FCER1AP12319 257 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 ITGB5P18084 799 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 NF2P35240 595 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 KLK7P49862 253 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SETQ01105 290 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 VWA3BQ502W6 1294 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 CCNI2Q6ZMN8 369 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 LEKR1Q6ZMV7 388 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 CATSPER3Q86XQ3 398 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms