RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 EEPD1Q7L9B9 569 aa27.1■■□□□ 1.93
U2AF1-204ENST00000459639 IFNKQ9P0W0 207 aa27.1■■□□□ 1.93
U2AF1-204ENST00000459639 GABBR1Q9UBS5 961 aa27.1■■□□□ 1.93
U2AF1-204ENST00000459639 SYNGAP1Q96PV0 1343 aa27.09■■□□□ 1.93
U2AF1-204ENST00000459639 IGSF9BQ9UPX0 1349 aa27.09■■□□□ 1.93
U2AF1-204ENST00000459639 SLC15A5A6NIM6 579 aa27.09■■□□□ 1.93
U2AF1-204ENST00000459639 CBFA2T2O43439 604 aa27.09■■□□□ 1.93
U2AF1-204ENST00000459639 SERPINC1P01008 464 aa27.09■■□□□ 1.93
U2AF1-204ENST00000459639 CDK11BP21127 795 aaKnown RBP27.09■■□□□ 1.93
U2AF1-204ENST00000459639 XPO4Q9C0E2 1151 aaKnown RBP27.09■■□□□ 1.93
U2AF1-204ENST00000459639 ZHX3Q9H4I2 956 aa27.09■■□□□ 1.93
U2AF1-204ENST00000459639 DDX41Q9UJV9 622 aaKnown RBP27.09■■□□□ 1.93
U2AF1-204ENST00000459639 TRIM49BA6NDI0 452 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 TLR2O60603 784 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 PMS1P54277 932 aaKnown RBP27.08■■□□□ 1.93
U2AF1-204ENST00000459639 SP4Q02446 784 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 CENPPQ6IPU0 288 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 FOXR2Q6PJQ5 311 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 PADI6Q6TGC4 694 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 METTL7BQ6UX53 244 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 SFR1Q86XK3 245 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 FBXO16Q8IX29 292 aaPredicted RBP27.08■■□□□ 1.93
U2AF1-204ENST00000459639 MYOCDQ8IZQ8 938 aa27.08■■□□□ 1.93
U2AF1-204ENST00000459639 NOC3LQ8WTT2 800 aaKnown RBP27.08■■□□□ 1.93
U2AF1-204ENST00000459639 CCDC43Q96MW1 224 aaKnown RBP27.08■■□□□ 1.93
U2AF1-204ENST00000459639 FAM13AO94988 1023 aa27.08■■□□□ 1.92
U2AF1-204ENST00000459639 KIF20AO95235 890 aa27.08■■□□□ 1.92
U2AF1-204ENST00000459639 HS1BP3Q53T59 392 aa27.08■■□□□ 1.92
U2AF1-204ENST00000459639 SWSAP1Q6NVH7 229 aa27.08■■□□□ 1.92
U2AF1-204ENST00000459639 C17orf99Q6UX52 265 aa27.08■■□□□ 1.92
U2AF1-204ENST00000459639 CCDC60Q8IWA6 550 aaPredicted RBP27.08■■□□□ 1.92
U2AF1-204ENST00000459639 TRIM47Q96LD4 638 aa27.08■■□□□ 1.92
U2AF1-204ENST00000459639 ZFYVE28Q9HCC9 887 aa27.08■■□□□ 1.92
U2AF1-204ENST00000459639 OLFML3Q9NRN5 406 aa27.08■■□□□ 1.92
U2AF1-204ENST00000459639 RSPH10B2B2RC85 870 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 SORBS3O60504 671 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 GGPS1O95749 300 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 PTMAP06454 111 aaKnown RBP27.07■■□□□ 1.92
U2AF1-204ENST00000459639 RSPH10BP0C881 870 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 TM4SF4P48230 202 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 ZNF131P52739 623 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 SPAG1Q07617 926 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 MAMDC4Q6UXC1 1216 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 DPP9Q86TI2 863 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 TIPINQ9BVW5 301 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 VTA1Q9NP79 307 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 SEL1LQ9UBV2 794 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 TELO2Q9Y4R8 837 aa27.07■■□□□ 1.92
U2AF1-204ENST00000459639 GOLGA6L6A8MZA4 724 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 ARIH2O95376 493 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 UBASH3AP57075 661 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 HSP90AA4PQ58FG1 418 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 CCDC62Q6P9F0 684 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 OTUD6AQ7L8S5 288 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 GLIS3Q8NEA6 775 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 SCFD2Q8WU76 684 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 THAP9Q9H5L6 903 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 PARVGQ9HBI0 331 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 SLC5A4Q9NY91 659 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 TBC1D7Q9P0N9 293 aa27.06■■□□□ 1.92
U2AF1-204ENST00000459639 IGKV6D-21A0A0A0MT36 114 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 ZNF862O60290 1169 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 LRRC63Q05C16 580 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 LRRC41Q15345 812 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 LY6KQ17RY6 165 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 DRC7Q8IY82 874 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 DUSP9Q99956 384 aaKnown RBP27.05■■□□□ 1.92
U2AF1-204ENST00000459639 SEMA6BQ9H3T3 888 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 BACH1O14867 736 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 STBD1O95210 358 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 TTLL4Q14679 1199 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 CELF3Q5SZQ8 465 aaKnown RBP27.05■■□□□ 1.92
U2AF1-204ENST00000459639 ANKRD40Q6AI12 368 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 MAML3Q96JK9 1138 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 FGFBP2Q9BYJ0 223 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 MLXIPQ9HAP2 919 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 ZNF302Q9NR11 478 aa27.05■■□□□ 1.92
U2AF1-204ENST00000459639 MAFBQ9Y5Q3 323 aaPredicted RBP27.05■■□□□ 1.92
U2AF1-204ENST00000459639 GSTTP1A0A1W2PQM5 241 aa27.04■■□□□ 1.92
U2AF1-204ENST00000459639 TPM3P06753 285 aa27.04■■□□□ 1.92
U2AF1-204ENST00000459639 PRKCEQ02156 737 aa27.04■■□□□ 1.92
U2AF1-204ENST00000459639 XKR9Q5GH70 373 aa27.04■■□□□ 1.92
U2AF1-204ENST00000459639 UTP14CQ5TAP6 766 aaKnown RBP27.04■■□□□ 1.92
U2AF1-204ENST00000459639 ANO5Q75V66 913 aa27.04■■□□□ 1.92
U2AF1-204ENST00000459639 CSGALNACT2Q8N6G5 542 aa27.04■■□□□ 1.92
U2AF1-204ENST00000459639 SPC24Q8NBT2 197 aa27.04■■□□□ 1.92
U2AF1-204ENST00000459639 CTAGE1Q96RT6 745 aa27.04■■□□□ 1.92
U2AF1-204ENST00000459639 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.04■■□□□ 1.92
U2AF1-204ENST00000459639 HIP1RO75146 1068 aa27.03■■□□□ 1.92
U2AF1-204ENST00000459639 MAPK7Q13164 816 aa27.03■■□□□ 1.92
U2AF1-204ENST00000459639 MORN1Q5T089 497 aa27.03■■□□□ 1.92
U2AF1-204ENST00000459639 PLA2G4FQ68DD2 849 aa27.03■■□□□ 1.92
U2AF1-204ENST00000459639 EPM2AIP1Q7L775 607 aaPredicted RBP27.03■■□□□ 1.92
U2AF1-204ENST00000459639 ANKRD20A12PQ8NF67 263 aa27.03■■□□□ 1.92
U2AF1-204ENST00000459639 SCFD1Q8WVM8 642 aa27.03■■□□□ 1.92
U2AF1-204ENST00000459639 SEPT1Q8WYJ6 367 aa27.03■■□□□ 1.92
U2AF1-204ENST00000459639 TSG101Q99816 390 aa27.03■■□□□ 1.92
U2AF1-204ENST00000459639 MGAMO43451 1857 aa27.02■■□□□ 1.92
U2AF1-204ENST00000459639 USO1O60763 962 aaKnown RBP27.02■■□□□ 1.92
U2AF1-204ENST00000459639 XKR3Q5GH77 459 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms